BAC Information

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BAC

Clone NameB6Ng01-338F06
Chromosome18 (Build37)
Map Location 75,581,984 - 75,744,598
singlet/doubletdoublet
Overlap geneGm672
Upstream geneMyo5b, Acaa2, LOC672799, Lipg, Rpl17, BC031181, Dym, LOC628356, EG667777, Smad7
Downstream geneZbtb7c, 4833419G08Rik, LOC668184, Smad2, LOC668188
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338F06.bB6Ng01-338F06.g
ACCGA122667GA122668
length2831,176
definitionB6Ng01-338F06.b B6Ng01-338F06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,744,317 - 75,744,598)(75,581,984 - 75,583,159)
sequence
attacaagatcctgagttgaaagttcgtccgtaggaagcaaaaagcttgt
gataaagccctgtgccatggcctataaattctacctgacccagctgataa
cataatggttaagctggccaaaggctgcctgtgtgagggataatggttgc
tgttctattcatatgacacacacatacagagggggaaggagggagggaga
gagagagctccccaaccaagatcccatgggtgtgttttacaaacacttcg
aacatgccctgcaagctcattgtggtttttgta
cgcggaattctctctctctctctctctctctctctctctcacacacacac
acacacacacacacacacacacacacacacacacagaactgtctctcaca
cagaaaattatctctcacacacagaatcttctctcacacacactcagaac
tgtctctcatacagagattcttttctctctcacagaattctcttcctctc
acaagattgtctctcacagacagaactgtctctcacaggcagaattgtct
ctctcacacagaaaattctctctcacacacagaattctctcacataagag
aattctctccctcacagacttttttctaacagaactccttctcacacaca
gaattccttctcacaaacaaaaggggtgtctagagaaagccagccagagc
aaggctttaaggagcagtacccaggcacacggccacgtagtcccagagga
catacatgaagctcctgctcttaacccccctgttatgaccaccagcagta
aatagcaaaacccaaaacaataaatccagacaagggggcgctaaccatga
tggctttacctagctgagcggctgcggtgggggacctggcggtaaataaa
cgagcaaaaagactgtaaatcaccctgggagaccagatcgatacacaggg
aacttgacccaactctcaccagggagtgtgtgtgccagtagtcctgagca
acggggtggggactctccaggctctgctggtacggagaagccctgtttgg
aacacagggtcgcagcccgcctctgctgggagcttgcggagctaccccgg
ggctggtggctggatctctctgagctgccttcacttgggctgtgaatcaa
acaggcaccaatattctaagaccccagttccctatgctctagtctggggt
gattgacagttctgccaagaaccccagctggccagtgacaggaagacagc
acgcacgggtacagggaagcaattttactggaaagatgagaggaaattgc
atcttttattaattccccggccggtttggagagaggcatgtttggcgggc
tgcagagccgcaaggcatcccaagcttcggtttcttggaaatcgctgctc
agagcttgccaggaggctcgggcttccatctcttctgcttgagggaagca
ggatcgacgagtctagactagggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_75744317_75744598
seq2: B6Ng01-338F06.b_52_334 (reverse)

seq1  TACAAAAACCACAATGGGCTTTCCGGGCATTTTCGGTGTGTTTGTAAAAC  50
      |||||||||||||||| |||| | |||||| ||||  |||||||||||||
seq2  TACAAAAACCACAATGAGCTTGCAGGGCATGTTCGAAGTGTTTGTAAAAC  50

seq1  ACACCCATGGGATCTTGGTTGGGGAGCTCTCTCTCTCCCTCCCTCCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCATGGGATCTTGGTTGGGGAGCTCTCTCTCTCCCTCCCTCCTTCC  100

seq1  CCCTCTGTATGTGTGTGTCATATGAATAGAACAGCAACCATTATCCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGTATGTGTGTGTCATATGAATAGAACAGCAACCATTATCCCTCA  150

seq1  CACAGGCAGCCTTTGGCCAGCTTAACCATTATGTTATCAGCTGGGTCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCAGCCTTTGGCCAGCTTAACCATTATGTTATCAGCTGGGTCAGG  200

seq1  TAGAATTTATAGGCCATGGCACAGGGCTTTATCACAAGCTTTTTGCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTTATAGGCCATGGCACAGGGCTTTATCACAAGCTTTTTGCTTCC  250

seq1  TACGGAC-AACTTTCAACTCAGGATCTTGTAAT  282
      ||||||| |||||||||||||||||||||||||
seq2  TACGGACGAACTTTCAACTCAGGATCTTGTAAT  283

seq1: chr18_75581984_75583159
seq2: B6Ng01-338F06.g_70_1241

seq1  GAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACAC  50

seq1  ACACACACACACACACACACACACACACACAGAACTGTCTCTCACACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACAGAACTGTCTCTCACACAGA  100

seq1  AAATTATCTCTCACACACAGAATCTTCTCTCACACACACTCAGAACTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCTCTCACACACAGAATCTTCTCTCACACACACTCAGAACTGTC  150

seq1  TCTCATACAGAGATTCTTTTCTCTCTCACAGAATTCTCTTCCTCTCACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATACAGAGATTCTTTTCTCTCTCACAGAATTCTCTTCCTCTCACAA  200

seq1  GATTGTCTCTCACAGACAGAACTGTCTCTCACAGGCAGAATTGTCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTCTCTCACAGACAGAACTGTCTCTCACAGGCAGAATTGTCTCTCT  250

seq1  CACACAGAAAATTCTCTCTCACACACAGAATTCTCTCACATAAGAGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAAAATTCTCTCTCACACACAGAATTCTCTCACATAAGAGAATT  300

seq1  CTCTCCCTCACAGACTTTTTTCTAACAGAACTCCTTCTCACACACAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTCACAGACTTTTTTCTAACAGAACTCCTTCTCACACACAGAAT  350

seq1  TCCTTCTCACAAACAAAAGGGGTGTCTAGAGAAAGCCAGCCAGAGCAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCACAAACAAAAGGGGTGTCTAGAGAAAGCCAGCCAGAGCAAGG  400

seq1  CTTTAAGGAGCAGTACCCAGGCACACGGCCACGTAGTCCCAGAGGACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGGAGCAGTACCCAGGCACACGGCCACGTAGTCCCAGAGGACATA  450

seq1  CATGAAGCTCCTGCTCTTAACCCCCCTGTTATGACCACCAGCAGTAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGCTCCTGCTCTTAACCCCCCTGTTATGACCACCAGCAGTAAATA  500

seq1  GCAAAACCCAAAACAATAAATCCAGACAAGGGGGCGCTAACCATGATGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACCCAAAACAATAAATCCAGACAAGGGGGCGCTAACCATGATGGC  550

seq1  TTTACCTAGCTGAGCGGCTGCGGTGGGGGACCTGGCGGTAAATAAACGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTAGCTGAGCGGCTGCGGTGGGGGACCTGGCGGTAAATAAACGAG  600

seq1  CAAAAAGACTGTAAATCACCCTGGGAGACCAGATCGATACACAGGGAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGACTGTAAATCACCCTGGGAGACCAGATCGATACACAGGGAACT  650

seq1  TGACCCAACTCTCACCAGGGAGTGTGTGTGCCAGTAGTCCTGAGCAACGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAACTCTCACCAGGGAGTGTGTGTGCCAGTAGTCCTGAGCAACGG  700

seq1  GGTGGGGACTCTCCAGGCTCTGCTGGTACGGAGAAGCCCTGTTTGGAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGACTCTCCAGGCTCTGCTGGTACGGAGAAGCCCTGTTTGGAACA  750

seq1  CAGGGTCGCAGCCCGCCTCTGCTGGGAGCTTGCGGAGCTACCCCGGGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCGCAGCCCGCCTCTGCTGGGAGCTTGCGGAGCTACCCCGGGGCT  800

seq1  GGTGGCTGGATCTCTCTGAGCTGCCTTCACTTGGGCTGTGAATCAAACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTGGATCTCTCTGAGCTGCCTTCACTTGGGCTGTGAATCAAACAG  850

seq1  GCACCAATATTCTAAGACCCCAGTTCCCTATGCTCTAGTCTGGGGTGAAT  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCACCAATATTCTAAGACCCCAGTTCCCTATGCTCTAGTCTGGGGTGATT  900

seq1  GACAGTTCTGCCAAG-ACCCCAGCTGGCCAGTGACAGGAAGACAGCAACG  949
      ||||||||||||||| |||||||||||||||||||||||||||||| |||
seq2  GACAGTTCTGCCAAGAACCCCAGCTGGCCAGTGACAGGAAGACAGC-ACG  949

seq1  CAC-GGTACAGGG-AGCAATTTTACTGGAAAGATGAGAGGAAATTGCATC  997
      ||| ||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CACGGGTACAGGGAAGCAATTTTACTGGAAAGATGAGAGGAAATTGCATC  999

seq1  -TTTAATAATTCACCGGCCGGTTTGGAGAGAGGCA-GGTTGGCGGGCTGC  1045
       |||| |||||| |||||||||||||||||||||| | ||||||||||||
seq2  TTTTATTAATTCCCCGGCCGGTTTGGAGAGAGGCATGTTTGGCGGGCTGC  1049

seq1  AGAGCCGCCAGGCGATCCC-AGCTTCGG-TTCCTGGAAATCCGCTGGCTC  1093
      |||||||| |||| ||||| |||||||| ||| ||||||| |||| ||| 
seq2  AGAGCCGCAAGGC-ATCCCAAGCTTCGGTTTCTTGGAAAT-CGCT-GCT-  1095

seq1  CAGAGCCTGCCCAAGAGGCTCGGGGCCTCCATCTCCTTCTGGCTGAGGGA  1143
      |||||| || ||| ||||||| |||| ||||||| ||||||  |||||||
seq2  CAGAGCTTG-CCAGGAGGCTC-GGGCTTCCATCT-CTTCTGCTTGAGGGA  1142

seq1  CAGCAGGAGCCGACAGAGTCTAGACCAGGGTGA  1176
       |||||||  |||| |||||||||| |||||||
seq2  -AGCAGGA-TCGAC-GAGTCTAGACTAGGGTGA  1172