BAC Information

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BAC

Clone NameB6Ng01-340C18
Chromosome18 (Build37)
Map Location 28,009,615 - 28,010,375
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665977, EG665646
Downstream geneEG271505, EG625997, BC051408
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340C18.bB6Ng01-340C18.g
ACCGA123957GA123958
length1,217761
definitionB6Ng01-340C18.b B6Ng01-340C18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagatatgcagggttctgtctcctgaatgctggtattaaaggc
ttgtaccaccacacctagacttaagtttttgtctacttggaatgtactct
caaccactctggccttgaattcagagatctgcttgcctttgtttcttgcc
tgggcctaagcttttcatggccactatgcttcaagatccatatcaaaagc
cactatcctccagcctccaaatttgaatcatatctaggctctccatttct
ggattgtagtttatttctgattagaagtccaaatgaaaaaatggaaacag
taatcaggtaataacacataacatcacattactcttccttgttcaactgg
aaccacaaacaataagtttagctgtgtgggatcttacctggagattatta
cttccttaatctttttatctccttgaacacaaaattaagctccatttcac
ttcctggtgcccctttattacctgaaccacacagtttatatttcttcttt
taaagcttgctacattttatcaaaaccctcttcatgagagtgaaccagag
gacaacacctatgctggggttttcctagacttcctttgtcaattgaaatt
tctctactttagctttaggtagactctataaacaatgccccaaagtagcc
acattatttatcaaactatcacaaatacagtttctaggccatatagtaac
attcttctcctatgaaatttcttgactgaggtctccacagttcaaaacac
tctcagcatcattatcttctatatttctattagggtagctcattaagccc
aacttatatcattccattgctttccaaagtcccaaaatctacatttctcc
aaacaaaagcatggtcaggcctatcccatctagaccctactcctggtacc
aacttctgtcttagggtttccattgctgtgaggagacatcatgaacaagc
aaattttataaagacacatttaattgagctggcttataggttcagagttc
agtccatatcatcaagtgaaaacatggcagcttcagcagatatgcacaga
gagctgagagttctgcatctgttcaagcaaatagagagactactccatgt
agctagagagtctaatgccacccccactgtgacaacttctcacaggccag
tctatatggcacttctgggccagcatatttcaaccacaccacagcttgaa
acacggtgtgagagtca

gaattctgttcacattgttgtgagcacagctggatggtctaactgctttc
cttggcagatttgaagactgaatgccagcagtctacagtgatattctgag
gttcttgctgtcatgtgactgcatctggcttcggcttccctcactgttgg
ttatgcaaactggacatttctgggaaggttcagaagcaggaataaaatgt
ttgtggttctcctttaacatgggattataggattgatttactaattttat
gattgatatagagtatggtgggaaatctgcatactcactggcctcttcat
gaatacaaatttccaattgtaaatgtgtgttaggtctacatgttcacttg
aagagagaatttgtaaagtgacatattttatgcatgctcacatacagttg
cagattttgaggcaagattatcatctagaatcacattatcttcttaaatg
ttttgtgttttgtatcatatttattcaacacatatttatttaataaacat
gttgagtttgaaatttcttttatatcgattgaccattcctcagacattag
aataggaaagtacctacatacaaacagaaaatatgggaagaaacagcaag
agacctcagagtctttacaagcagacagactcttattggagatggaagag
gagaaataggactagggaatacacagtctgatgctcattttgatattagt
atttgtgttctattactataatttgtgtgtgtgtgtgtgtttgtgtgtgt
gtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_28009615_28010375
seq2: B6Ng01-340C18.g_65_825 (reverse)

seq1  CACACACACACACACACACAAACACACACACACACACAAATTATAGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACAAACACACACACACACACAAATTATAGTAAT  50

seq1  AGAACACAAATACTAATATCAAAATGAGCATCAGACTGTGTATTCCCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACAAATACTAATATCAAAATGAGCATCAGACTGTGTATTCCCTAG  100

seq1  TCCTATTTCTCCTCTTCCATCTCCAATAAGAGTCTGTCTGCTTGTAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTTCTCCTCTTCCATCTCCAATAAGAGTCTGTCTGCTTGTAAAGA  150

seq1  CTCTGAGGTCTCTTGCTGTTTCTTCCCATATTTTCTGTTTGTATGTAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGTCTCTTGCTGTTTCTTCCCATATTTTCTGTTTGTATGTAGGT  200

seq1  ACTTTCCTATTCTAATGTCTGAGGAATGGTCAATCGATATAAAAGAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTATTCTAATGTCTGAGGAATGGTCAATCGATATAAAAGAAATT  250

seq1  TCAAACTCAACATGTTTATTAAATAAATATGTGTTGAATAAATATGATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCAACATGTTTATTAAATAAATATGTGTTGAATAAATATGATAC  300

seq1  AAAACACAAAACATTTAAGAAGATAATGTGATTCTAGATGATAATCTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACAAAACATTTAAGAAGATAATGTGATTCTAGATGATAATCTTGC  350

seq1  CTCAAAATCTGCAACTGTATGTGAGCATGCATAAAATATGTCACTTTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAATCTGCAACTGTATGTGAGCATGCATAAAATATGTCACTTTACA  400

seq1  AATTCTCTCTTCAAGTGAACATGTAGACCTAACACACATTTACAATTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCTCTTCAAGTGAACATGTAGACCTAACACACATTTACAATTGGA  450

seq1  AATTTGTATTCATGAAGAGGCCAGTGAGTATGCAGATTTCCCACCATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTATTCATGAAGAGGCCAGTGAGTATGCAGATTTCCCACCATACT  500

seq1  CTATATCAATCATAAAATTAGTAAATCAATCCTATAATCCCATGTTAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCAATCATAAAATTAGTAAATCAATCCTATAATCCCATGTTAAAG  550

seq1  GAGAACCACAAACATTTTATTCCTGCTTCTGAACCTTCCCAGAAATGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCACAAACATTTTATTCCTGCTTCTGAACCTTCCCAGAAATGTCC  600

seq1  AGTTTGCATAACCAACAGTGAGGGAAGCCGAAGCCAGATGCAGTCACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCATAACCAACAGTGAGGGAAGCCGAAGCCAGATGCAGTCACATG  650

seq1  ACAGCAAGAACCTCAGAATATCACTGTAGACTGCTGGCATTCAGTCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAGAACCTCAGAATATCACTGTAGACTGCTGGCATTCAGTCTTCA  700

seq1  AATCTGCCAAGGAAAGCAGTTAGACCATCCAGCTGTGCTCACAACAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCCAAGGAAAGCAGTTAGACCATCCAGCTGTGCTCACAACAATGT  750

seq1  GAACAGAATTC  761
      |||||||||||
seq2  GAACAGAATTC  761


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