BAC Information

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BAC

Clone NameB6Ng01-341D22
Chromosome18 (Build37)
Map Location 40,333,021 - 40,333,509
singlet/doubletsinglet
Overlap genenone
Upstream geneArhgap26, Nr3c1, Pabpc2, LOC100041939
Downstream geneYipf5, Kctd16, EG225416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341D22.bB6Ng01-341D22.g
ACCGA124690GA124691
length735831
definitionB6Ng01-341D22.b B6Ng01-341D22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatttgcttcatatataaaaacagaaagcctttgctttcttact
gccaaggatgaataaaaatgatcctttctttggggagcctaagaggagtc
ctggctcacaaaggatgaccaacaaggagttcttatctaaatttcaatgt
ctttttaaggttcttgttcttctggtagagtccagagatttgtgtccaca
cagaggcagaaaattgactgaagccctcaaactgatcggataatcatcta
atgaggtgttgcataatcgtcagcaaggtgtgtcagtaggtaaagacact
agccactaagactgacaacagaactttgtccttggagaactttgtccttg
ggagtcacaaggtgcaaggagaaaatttgtaagttgacccctgatctcca
cacttgcatacacacagactatagattggattcttacacattgatagatg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtaacaagctccaga
tacatacagacaataaagaacatctaacaccagagataaccagatggcga
aagtcaaacacaagaatcttactaacagaaaaccaagatgaattgagccc
attttttcccaccatagcaaatactggatttccccaacacactagaaaaa
acaagatgtgaatttataacatatctcatgatgctgatagacataattaa
ggacataatttaactctcttaaaaaattagaggag
gaattctctgaactcactgtcctttcaggtccacctttgctctggctctg
gcaactgactgaaccaaacaataggctcatacctagatcttcgaaaatgg
taatggagttgaaaacacactctaacagaaagaggaaggctccactcact
agaagactttcactagaagcctcgccctgccagcagtttaggaatttgta
aagccaatctggacaatatttacatgatttggaatttctacttcatgttt
aatgtttaataaaataaagcttgttgaaggccctgtgatccatccaatag
ctgacggttagcatccacttctgtgtttgctaggccccagcatagcctca
caagagacagatatatctaagtcctttcagcaaaatcttgtatgcaatgg
tgtcagcgtttggaggctgattatgggatggattccccggtggggtagtc
tctggatggtccatcctttcgtcttagctccaaaatttgtctctgtaact
ccttccatgggtgttttgttcccaattctaagaaggggcaaagtgtccat
gctttggtcttcgttcttcttgagtttcatgtgttttgcaaattgtatct
tatatcttgggtattctgagtttctgggctaatatccacttatcagtgag
tacatatggaggagctagagaaagcacccaaggagctaaagggatctgca
accctataggtggaacaacaacatgaactaaccagtacctcccagagctc
atgtctctagctgcatatgtatcagaagatggcctagtcggccatcattg
gaaaaggtcttgtatactttatatgccccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_40333021_40333509
seq2: B6Ng01-341D22.b_39_527

seq1  GAATTCCATTTGCTTCATATATAAAAACAGAAAGCCTTTGCTTTCTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTGCTTCATATATAAAAACAGAAAGCCTTTGCTTTCTTACT  50

seq1  GCCAAGGATGAATAAAAATGATCCTTTCTTTGGGGAGCCTAAGAGGAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGATGAATAAAAATGATCCTTTCTTTGGGGAGCCTAAGAGGAGTC  100

seq1  CTGGCTCACAAAGGATGACCAACAAGGAGTTCTTATCTAAATTTCAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCACAAAGGATGACCAACAAGGAGTTCTTATCTAAATTTCAATGT  150

seq1  CTTTTTAAGGTTCTTGTTCTTCTGGTAGAGTCCAGAGATTTGTGTCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAGGTTCTTGTTCTTCTGGTAGAGTCCAGAGATTTGTGTCCACA  200

seq1  CAGAGGCAGAAAATTGACTGAAGCCCTCAAACTGATCGGATAATCATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGAAAATTGACTGAAGCCCTCAAACTGATCGGATAATCATCTA  250

seq1  ATGAGGTGTTGCATAATCGTCAGCAAGGTGTGTCAGTAGGTAAAGACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTGTTGCATAATCGTCAGCAAGGTGTGTCAGTAGGTAAAGACACT  300

seq1  AGCCACTAAGACTGACAACAGAACTTTGTCCTTGGAGAACTTTGTCCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTAAGACTGACAACAGAACTTTGTCCTTGGAGAACTTTGTCCTTG  350

seq1  GGAGTCACAAGGTGCAAGGAGAAAATTTGTAAGTTGACCCCTGATCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCACAAGGTGCAAGGAGAAAATTTGTAAGTTGACCCCTGATCTCCA  400

seq1  CACTTGCATACACACAGACTATAGATTGGATTCTTACACATTGATAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCATACACACAGACTATAGATTGGATTCTTACACATTGATAGATG  450

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAA  489
      |||||||||||||||||||||||||||||||||| ||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTAA  489