BAC Information

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BAC

Clone NameB6Ng01-346A19
Chromosome18 (Build37)
Map Location 75,984,685 - 76,105,093
singlet/doubletdoublet
Overlap geneZbtb7c
Upstream geneLOC672799, Lipg, Rpl17, BC031181, Dym, LOC628356, EG667777, Smad7, Gm672
Downstream gene4833419G08Rik, LOC668184, Smad2, LOC668188, EG639576, EG664805
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346A19.bB6Ng01-346A19.g
ACCGA128063GA128064
length7941,003
definitionB6Ng01-346A19.b B6Ng01-346A19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,984,685 - 75,985,479)(76,104,541 - 76,105,093)
sequence
gaattcaagaagcacaggccatcatcaaggttgacttgggtagagaagtc
tctttgtggcagtactgaaaccaaccaatctctctctctctctctctctc
tctctctctctctctctctctctctctgatgagatctagaaacatacccc
ccttgaagagccaggacttgtgttttttctataaaaaaaaaaaactctag
aggtcttcagagcaggtgtggatagatatgaggatggatagagggagggg
tgttctcctgggccaaaggcaccactctgcctcacaggaggagagaattt
catgagcgggtcaaaacctgctgacttgcgaacgccacacacgcacgacg
acaaaagagtgtatgtgtgttttctgtctctcactcttgaacattctcgc
actgattgcgtgtatacaaaatataaaacagaaggcgagagtgtggggga
gctgctaaatggggaagagtgcaaaattaaaattaaacttccccggcacc
ctaagtttgtggtgccccactccattctttctctatatccaaaactaaac
atataaaaacaaaaggatgcacgtaaaatgtaggcatgtacagcgtcccc
aaacttaaaaaaaaatacacccatcttcccataatcagaaaggctgcttg
atgcttaaacctgacacttccactgtcagtttctgatgctggaggagtgg
aggcccctcacactttaaaaaagacgttgggtggctctagattctgtccc
tcaaataaaaaaaactgttctcctttccaggcatattggagagg
gaattctatgtgtctcttaccaatggcacgtactggatctttcctcaaag
attttttttaatatgagagatttatggagagtttttacatattttggtaa
aaaatctgtttgggtatctgtataatagcttaggcttcagctttatgaat
tcctatacatttcatatacgagtcctacatttatatcattttgcctctcc
ccttccagttcttcccatgtcacccccattcctcaaattcgtgattcttc
tttaaggttattgttatgcatacatccatatgtaggctataaatatatat
atgtagggtatatatgtaccctatattcatatgagggactcatcccagaa
gcagactagttatatctctctcagcagctactaatagtagatcaagcaga
tcaatcctaatagacttgatctaggtggagggccctgtgagatttgcccc
atccacgtgggcaggtcaattatggcattatacaggcctcatttaaggaa
ccatattgttgagatgttatgagtgtagcatctctgtcatgtctagaaga
cactctctagcagtaggcattctggctctttctgctcacttgtctgcact
gttccctgggccttaaatgtagggttgttggagatgtaacaatgttgcag
agtaccccacagacaattagtctctgcattttgaggagttgtatgtctct
gtagtggcttctgtctgggtcaaaaagctgctctttgctgaggagcagga
gctgcaggcatctgcggatgtagtatctgggatgcagttagacatgatac
tgactggggaaagtggtgggagtaggttctctaggatctgtggcctcgcc
ttctatgggtagttggctaagtttacagtaccaggaatgaattccctcct
aatgggaagggcttacgtccaattagacagttgttggctatccccaagat
taaagtaccactaatgcagcactggggatatcttgctgggctgggcattt
ttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_75984685_75985479
seq2: B6Ng01-346A19.b_46_839

seq1  GAATTCAAGAAGCACAGGCCATCATCAAGGTTGACTTGGGTAGAGAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAGCACAGGCCATCATCAAGGTTGACTTGGGTAGAGAAGTC  50

seq1  TCTTTGTGGCAGTACTGAAACCAACCAATCTCTCTCTCTCTCTCTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGGCAGTACTGAAACCAACCAATCTCTCTCTCTCTCTCTCTCTC  100

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTGATGAGTCCAAGCATCATACCAC  150
      |||||||||||||||||||||||||||||||||  | || | |||||| |
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTGATGAGATCTAGAAACATACCCC  150

seq1  CCTTGGAGAGTCAGGACTTGTGTTTTTTCCACCAGTGCCATTCATTGGCA  200
      ||||| |||| |||||||||||||||||| |  |     |   | |    
seq2  CCTTGAAGAGCCAGGACTTGTGTTTTTTCTATAAAAAAAAAAAACTCTAG  200

seq1  GTGTCTTCAGAGCAGCTGTGGATAGCTTTGTGCATGGATAGAGGGAGGGT  250
        ||||||||||||| ||||||||| | || | |||||||||||||||| 
seq2  AGGTCTTCAGAGCAGGTGTGGATAGATATGAGGATGGATAGAGGGAGGGG  250

seq1  CCCTCTCCAGGGCCAAGGGGTCCACTCTGCCTCACAGGAGGAGAGAATTT  300
         ||||| ||||||| ||  |||||||||||||||||||||||||||||
seq2  TGTTCTCCTGGGCCAAAGGCACCACTCTGCCTCACAGGAGGAGAGAATTT  300

seq1  CATTAGTGTTTCACACCCTGCTGACTTCCAAACCTCACAGAAACAGGACT  350
      ||| || |  ||| | ||||||||||| | |||  |||| |  || ||| 
seq2  CATGAGCGGGTCAAAACCTGCTGACTTGCGAACGCCACACACGCACGAC-  349

seq1  TATAATAAACAGACT-CACAAGGAAACT-TAGAACAGGACTGAACATTTT  398
         |  ||| ||  |      |    || |    ||    |||||||| |
seq2  --GACAAAAGAGTGTATGTGTGTTTTCTGTCTCTCACTCTTGAACATTCT  397

seq1  ATTTACTG-CTGCTTGTTTTCTGATTATCAAAGCACTAATCGTCATTATA  447
          ||||  ||| ||| | |  | ||| ||| ||  |  ||  | | | 
seq2  -CGCACTGATTGCGTGTATACAAAATAT-AAAACAGAAGGCGAGAGTGTG  445

seq1  GAAAATCTGCGAAATGGGGAAGAGTGCAAAATTAAAATTAAACTTCCCCG  497
      |   | |||| |||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGCTGCTAAATGGGGAAGAGTGCAAAATTAAAATTAAACTTCCCCG  495

seq1  GCACCCTAAGTTTGTTGTGCCCCACTCCATTCTTTCTCTATATCCAGAAA  547
      ||||||||||||||| |||||||||||||||||||||||||||||| || 
seq2  GCACCCTAAGTTTGTGGTGCCCCACTCCATTCTTTCTCTATATCCAAAAC  545

seq1  TAAACATATAAAAACAGAAGGATGCACGTAAAATGTAGGCATGTACAGCG  597
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAAACATATAAAAACAAAAGGATGCACGTAAAATGTAGGCATGTACAGCG  595

seq1  TCCCCAAACTTAAAAAAAAAATACACCCATCTTCCCCTAATCAGAAAGGC  647
      ||||||||||| |||||||||||||||||||||||| |||||||||||||
seq2  TCCCCAAACTT-AAAAAAAAATACACCCATCTTCCCATAATCAGAAAGGC  644

seq1  TGCTTGATCCTTAAACCTGACACTTCCACTGTCAGTTACTGATGCTGGAG  697
      |||||||| |||||||||||||||||||||||||||| ||||||||||||
seq2  TGCTTGATGCTTAAACCTGACACTTCCACTGTCAGTTTCTGATGCTGGAG  694

seq1  GAGTGGAGGCCCCTCACACTTT-AAAAAGACCTTGGGTGGCTCTAGCTTC  746
      |||||||||||||||||||||| |||||||| |||||||||||||| |||
seq2  GAGTGGAGGCCCCTCACACTTTAAAAAAGACGTTGGGTGGCTCTAGATTC  744

seq1  TGTACATCAAATAAAGAAAACGGTTCTCCTTTCC-GGCATATTGGAGAGG  795
      ||| | ||||||||| ||||| |||||||||||| |||||||||||||||
seq2  TGTCCCTCAAATAAAAAAAACTGTTCTCCTTTCCAGGCATATTGGAGAGG  794

seq1: chr18_76104541_76105093
seq2: B6Ng01-346A19.g_66_618 (reverse)

seq1  GTGTCTTCTAGACATGACAGAGATGCTACACTCATAACATCTCAACAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTCTAGACATGACAGAGATGCTACACTCATAACATCTCAACAATA  50

seq1  TGGTTCCTTAAATGAGGCCTGTATAATGCCATAATTGACCTGCCCACGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCTTAAATGAGGCCTGTATAATGCCATAATTGACCTGCCCACGTG  100

seq1  GATGGGGCAAATCTCACAGGGCCCTCCACCTAGATCAAGTCTATTAGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGGCAAATCTCACAGGGCCCTCCACCTAGATCAAGTCTATTAGGAT  150

seq1  TGATCTGCTTGATCTACTATTAGTAGCTGCTGAGAGAGATATAACTAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGCTTGATCTACTATTAGTAGCTGCTGAGAGAGATATAACTAGTC  200

seq1  TGCTTCTGGGATGAGTCCCTCATATGAATATAGGGTACATATATACCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGGGATGAGTCCCTCATATGAATATAGGGTACATATATACCCTA  250

seq1  CATATATATATTTATAGCCTACATATGGATGTATGCATAACAATAACCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATATTTATAGCCTACATATGGATGTATGCATAACAATAACCTT  300

seq1  AAAGAAGAATCACGAATTTGAGGAATGGGGGTGACATGGGAAGAACTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGAATCACGAATTTGAGGAATGGGGGTGACATGGGAAGAACTGGA  350

seq1  AGGGGAGAGGCAAAATGATATAAATGTAGGACTCGTATATGAAATGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGAGGCAAAATGATATAAATGTAGGACTCGTATATGAAATGTATA  400

seq1  GGAATTCATAAAGCTGAAGCCTAAGCTATTATACAGATACCCAAACAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCATAAAGCTGAAGCCTAAGCTATTATACAGATACCCAAACAGAT  450

seq1  TTTTTACCAAAATATGTAAAAACTCTCCATAAATCTCTCATATTAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACCAAAATATGTAAAAACTCTCCATAAATCTCTCATATTAAAAAA  500

seq1  AATCTTTGAGGAAAGATCCAGTACGTGCCATTGGTAAGAGACACATAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTGAGGAAAGATCCAGTACGTGCCATTGGTAAGAGACACATAGAA  550

seq1  TTC  553
      |||
seq2  TTC  553