BAC Information

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BAC

Clone NameB6Ng01-347N21
Chromosome18 (Build37)
Map Location 7,921,482 - 7,922,610
singlet/doubletsinglet
Overlap geneWac
Upstream geneLOC100039635, Mkx, LOC664778, Armc4, Mpp7, EG622384, LOC100039562, LOC100039606
Downstream geneLOC665121, LOC225134, LOC665132, EG433158, EG545242
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347N21.bB6Ng01-347N21.g
ACCGA129340GA129341
length1,1271,169
definitionB6Ng01-347N21.b B6Ng01-347N21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattgccagcaaccacatgatggatcacaaccatctgtacagct
atagtgtactcacatacataaaataaataaatcttaaaagaaaaaagaaa
agaaaaacaacaacaaaaaatactgtggatcagtaagctttagaaagaat
tttctttctagaaaaatgactagcaagcaattaagaaccatgctaatttt
actgctggaacccaaagtgcaaaagctaacacctgtgtgggtaacgttga
aggcattaaattgagtggtttcctattaaccattttgtgtctagtggagg
attttaaaatgaatgggcagggaaaaagcactatacttagttctagaaag
acaacacatttcaggggctagaaaagaacgtgtctgctaagaaagcacta
agtgcacaaatgtaagaatctaattttgtattctcagcatatatattaaa
aagccaggtgtgacagtatgtatctgtgattccagtattggagaagcaga
ggcaggagatctctcaggtttgctggccaaatctgacttcataaggccat
tcaaaaccattaaaaaatatatatttttaaatattatgtagaaacataca
tacacaaacacacaaagtgaaaaacttacctctgctctcgcaaagttgct
tgaatttcacatactcgaactaatgatctcaaattttttaactcagtaca
tatttctgacatatgtacacttcccatattatgggcttcttcacgcaatc
ttgatgcctacagttaacaaattgaagctcagataaaatatgaacataca
caagaatgtaagagaataacactaaaagtgcatctacataatcccagcac
cctagcagatgaaatgattaagatattcaatcccaagccagcttcatgtt
tacacactaactttcagaccatcattacacagaagaaaaaaggagaagga
aaacagtggaaacgagggaggagaagaagaaacacgacgagggagagata
tacctgtttctctgcgtggtctgcagccacccttgaacatgctttatgag
attatcattgagtgcgctgctagagtaggtgtaatggagcacgcaagtct
agcagatgcattctgtgggtacaacag
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgttggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaattcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaacttgccaaacacatgaaattcaag
aagaatgaagaccaaagtgtggatacttcaccctttcttagaaatgggaa
caaaacacccatggaaggagttacagagacaaaatttggagctgtgacaa
aaggatggaccatctagtgattgtcatatgcagggatccatcccataatc
agcttccaaatgctgacacaattgcatacactagcaagtttttgctgaaa
ggacccagatatagctctctcttgtgagactatgccagggcctagcaaac
acagaagtggatggtcacagtcagctattggatgggtcacacggccccaa
tggaggagctagagaattacccaaggagctaaagggaactgcaaccctat
aggtggacacatatgactaccagtacccgcgagctcttatctttagctgc
atatgttatcaaagatgctagtcggtcattcactgcaagagagcccattg
actgcaacttttatgccagtacaggcaaaccaagctaaatgggagtgaaa
tggataagagtgaatctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_7921482_7922610
seq2: B6Ng01-347N21.b_45_1171 (reverse)

seq1  CTGTTGTA-CCACAGAATGCATCTGCTAGACCTGCGTGCTCATTAACACC  49
      |||||||| |||||||||||||||||||||| |||||||||  | |||||
seq2  CTGTTGTACCCACAGAATGCATCTGCTAGACTTGCGTGCTCCATTACACC  50

seq1  TACTCTAGCAGCGCACTTCAATGATAATCTCATAAAGCATGTTCAAGGGT  99
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TACTCTAGCAGCGCAC-TCAATGATAATCTCATAAAGCATGTTCAAGGGT  99

seq1  GGCCTGCAGACCACGCAGAGAAACAGGTATATCTCTCCCTCGTCGTGTTT  149
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GG-CTGCAGACCACGCAGAGAAACAGGTATATCTCTCCCTCGTCGTGTTT  148

seq1  CTTCTTCTCCTCCCCTCGTTTCCACTGTTTTCCTTCTCCTTTTTTCTTCT  199
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTCCT-CCCTCGTTTCCACTGTTTTCCTTCTCCTTTTTTCTTCT  197

seq1  GTGTAATGATGGTCTGAAAGTTAGTGTGTAAACATGAAGCTGGCTTGGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATGATGGTCTGAAAGTTAGTGTGTAAACATGAAGCTGGCTTGGGA  247

seq1  TTGAATATCTTAATCATTTCATCTGCTAGGGTGCTGGGATTATGTAGATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATCTTAATCATTTCATCTGCTAGGGTGCTGGGATTATGTAGATG  297

seq1  CACTTTTAGTGTTATTCTCTTACATTCTTGTGTATGTTCATATTTTATCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTAGTGTTATTCTCTTACATTCTTGTGTATGTTCATATTTTATCT  347

seq1  GAGCTTCAATTTGTTAACTGTAGGCATCAAGATTGCGTGAAGAAGCCCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTCAATTTGTTAACTGTAGGCATCAAGATTGCGTGAAGAAGCCCAT  397

seq1  AATATGGGAAGTGTACATATGTCAGAAATATGTACTGAGTTAAAAAATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGGAAGTGTACATATGTCAGAAATATGTACTGAGTTAAAAAATTT  447

seq1  GAGATCATTAGTTCGAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCATTAGTTCGAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAGA  497

seq1  GGTAAGTTTTTCACTTTGTGTGTTTGTGTATGTATGTTTCTACATAATAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGTTTTTCACTTTGTGTGTTTGTGTATGTATGTTTCTACATAATAT  547

seq1  TTAAAAATATATATTTTTTAATGGTTTTGAATGGCCTTATGAAGTCAGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATATATATTTTTTAATGGTTTTGAATGGCCTTATGAAGTCAGAT  597

seq1  TTGGCCAGCAAACCTGAGAGATCTCCTGCCTCTGCTTCTCCAATACTGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCAGCAAACCTGAGAGATCTCCTGCCTCTGCTTCTCCAATACTGGA  647

seq1  ATCACAGATACATACTGTCACACCTGGCTTTTTAATATATATGCTGAGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGATACATACTGTCACACCTGGCTTTTTAATATATATGCTGAGAA  697

seq1  TACAAAATTAGATTCTTACATTTGTGCACTTAGTGCTTTCTTAGCAGACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAATTAGATTCTTACATTTGTGCACTTAGTGCTTTCTTAGCAGACA  747

seq1  CGTTCTTTTCTAGCCCCTGAAATGTGTTGTCTTTCTAGAACTAAGTATAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTTTTCTAGCCCCTGAAATGTGTTGTCTTTCTAGAACTAAGTATAG  797

seq1  TGCTTTTTCCCTGCCCATTCATTTTAAAATCCTCCACTAGACACAAAATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTCCCTGCCCATTCATTTTAAAATCCTCCACTAGACACAAAATG  847

seq1  GTTAATAGGAAACCACTCAATTTAATGCCTTCAACGTTACCCACACAGGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAGGAAACCACTCAATTTAATGCCTTCAACGTTACCCACACAGGT  897

seq1  GTTAGCTTTTGCACTTTGGGTTCCAGCAGTAAAATTAGCATGGTTCTTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTTTTGCACTTTGGGTTCCAGCAGTAAAATTAGCATGGTTCTTAA  947

seq1  TTGCTTGCTAGTCATTTTTCTAGAAAGAAAATTCTTTCTAAAGCTTACTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGCTAGTCATTTTTCTAGAAAGAAAATTCTTTCTAAAGCTTACTG  997

seq1  ATCCACAGTATTTTTTGTTGTTGTTTTTCTTTTCTTTTTTCTTTTAAGAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACAGTATTTTTTGTTGTTGTTTTTCTTTTCTTTTTTCTTTTAAGAT  1047

seq1  TTATTTATTTTATGTATGTGAGTACACTATAGCTGTACAGATGGTTGTGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTTATGTATGTGAGTACACTATAGCTGTACAGATGGTTGTGA  1097

seq1  TCCATCATGTGGTTGCTGGCAATTGAATTC  1129
      ||||||||||||||||||||||||||||||
seq2  TCCATCATGTGGTTGCTGGCAATTGAATTC  1127