Query= MSMg01no045_e09.b1 MSMg01no045_e09.b1 CHROMAT_FILE:
MSMg01no045_e09.b1 PHD_FILE: MSMg01no045_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:11 2005
(621 letters)
>mm_chr18_8492875_8493896
Length = 1022
Score = 694 bits (359), Expect = 0.0
Identities = 368/371 (99%), Gaps = 1/371 (0%)
Strand = Plus / Minus
Query: 252 cagccaaccactgcactgagcacagggttcccaatggaagagttagagaatggactgaag 311
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1022 cagccaaccactgcactgagcacagggttcccaatggaagagttagagaatgaactgaag 963
Query: 312 gagttgagtggggtttgcaacaccataggaagaataacaatatcaaccaaccagatccca 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 gagttgagtggggtttgcaacaccataggaagaataacaatatcaaccaaccagatccca 903
Query: 372 cagagttcccatggactaaaccaccaactaaagaggaatgacactggatggtgacctctg 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 cagagttcccatggactaaaccaccaactaaagaggaatgacactggatggtgacctctg 843
Query: 432 accccccaaacacatatgcacacatgtgtctataaatataagcatgcccatacatgcaca 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 accccccaaacacatatgcacacatgtgtctataaatataagcatgcccatacatgcaca 783
Query: 492 caaatttgaaaaatgaaatgaataaaaa-gaaattgactgatagccacggaacttgattt 550
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 782 caaatttgaaaaatgaaatgaaaaaaaaagaaattgactgatagccacggaacttgattt 723
Query: 551 aagtatgactattttcaggaatgccttcctgaagttaaagcccagaacttagagtacttt 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aagtatgactattttcaggaatgccttcctgaagttaaagcccagaacttagagtacttt 663
Query: 611 gttattgtgtc 621
|||||||||||
Sbjct: 662 gttattgtgtc 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1022
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1012
Effective search space: 618332
Effective search space used: 618332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_e09.g1 MSMg01no045_e09.g1 CHROMAT_FILE:
MSMg01no045_e09.g1 PHD_FILE: MSMg01no045_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:11 2005
(498 letters)
>mm_chr18_8464848_8465745
Length = 898
Score = 913 bits (472), Expect = 0.0
Identities = 491/498 (98%), Gaps = 4/498 (0%)
Strand = Plus / Plus
Query: 1 actctttataccaggctggcctgaaactcagagacgcacctgtctctgtctctgagtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 actctttataccaggctggcctgaaactcagagacgcacctgtctctgtctctgagtgct 262
Query: 61 gtgataaaagatgtgagccactattgcctgaatcttttcttccttttacatcatttcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gtgataaaagatgtgagccactattgcctgaatcttttcttccttttacatcatttcatt 322
Query: 121 catccatttatcccacacacacacacacacacacaaagtccaagcaacacattgacacat 180
||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||
Sbjct: 323 catccatttatcccacacacacacacataca-a-aaagtccaagcaacacattgacacac 380
Query: 181 agtagttcacatttcaggttagagattcttaaactgtatcttctagaactcttttaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtagttcacatttcaggttagagattcttaaactgtatcttctagaactcttttaaaga 440
Query: 241 tccagtaagcatatgtgtggatcatgtggtctgataaataaaatgtttgcacagagagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 tccagtaagcatatgtgtggatcatgtggtctgataaataaaatgtttgca--gagagag 498
Query: 301 agagagagagagagagagagagagagagagagagagagagagagagagagagaaggaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agagagagagagagagagagagagagagagagagagagagagagagagagagaaggaaag 558
Query: 361 cttagtcgggaaccttactactctcaaggttgcacacaataacctgaacctagtgacacc 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cttagtcaggaaccttactactctcaaggttgcacacaataacctgaacctagtgacacc 618
Query: 421 actcactaaagataaccagacacagtcttagaaccctatgatgcccactgggcaatgctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 actcactaaagataaccagacacagtcttagaaccctatgatgcccactgggcaatgctc 678
Query: 481 tgatgtgtatatctgaag 498
||||||||||||||||||
Sbjct: 679 tgatgtgtatatctgaag 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 81
Number of extensions: 34
Number of successful extensions: 34
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
