Query= MSMg01no051_m10.b1 MSMg01no051_m10.b1 CHROMAT_FILE:
MSMg01no051_m10.b1 PHD_FILE: MSMg01no051_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:51:56 2005
(329 letters)
>mm_chr18_71699078_71699805
Length = 728
Score = 524 bits (271), Expect = e-153
Identities = 301/313 (96%), Gaps = 5/313 (1%)
Strand = Plus / Plus
Query: 19 aattcttgcacatgatatttgatctctagtggttaatcttggatatatgaacatatatgt 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aattcttgcacatgatatttgatctctagtggttaatcttggatatatgaacatatatgt 278
Query: 79 attcttgcagagagatataattccca--gaagagattgtgaatttgtgagagtgtgtgga 136
|||| ||||||||| |||||| | ||||||||||||||||||||||||||||||||
Sbjct: 279 attcacgcagagagaaataatt---aaagaagagattgtgaatttgtgagagtgtgtgga 335
Query: 137 agaaggttaaaaataggagacagaatcaggaaggtttaaattacataaatatacatttca 196
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 336 agaaggttaaaaataggagacagaatcaggaaggtttaaagtacataaatatacatttca 395
Query: 197 tctaagaagttcttcaaaaccattttgctcatactaacacgtgtgtggggtaagaagaac 256
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 396 tctaagaagttcttcaaaaccattttgctcatactaacaagtgtgtggggtaagaagaac 455
Query: 257 actcatccattactagtggaagtgtaaacttttgcagtgactatataaatcagtacgggc 316
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 456 actcatccattactagtggaagtgtaaacttttgcagtgactatagaaatcagtacgggg 515
Query: 317 attccttgggaag 329
|||||||||||||
Sbjct: 516 attccttgggaag 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 728
Length adjustment: 9
Effective length of query: 320
Effective length of database: 719
Effective search space: 230080
Effective search space used: 230080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no051_m10.g1 MSMg01no051_m10.g1 CHROMAT_FILE:
MSMg01no051_m10.g1 PHD_FILE: MSMg01no051_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:51:56 2005
(257 letters)
>mm_chr18_71707999_71708654
Length = 656
Score = 435 bits (225), Expect = e-126
Identities = 249/257 (96%), Gaps = 1/257 (0%)
Strand = Plus / Minus
Query: 1 attgggagaatctggttcaagtgttgactttagtagctcataccaagatggataaccata 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 456 attgggagaatctggttcaagtgttgactttagtagctcagaccaagatggataaccata 397
Query: 61 cccctgtgcccagagatatttcttatcacgactcagtctgagaatgatctgtttgtattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 -tcctgtgcccagagatatttcttatcacgactcagtctgagaatgatctgtttgtattt 338
Query: 121 agctgcattattcaagctgccctttccactctcagatagatgtggatgttttatagtgtt 180
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 337 agcggcattattcaagctgccctttccactctcagatagatgtagatgttttatagtgtt 278
Query: 181 ctgccttctctccacccttacactgtgaccatgtattttctggaactactctcagaagca 240
||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 277 ctgtcttctctccacccttacactgtgaccatctatttcctggaactactctcagaagca 218
Query: 241 tatactccccaatcaca 257
|||||||||||||||||
Sbjct: 217 tatactccccaatcaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 257
Length of database: 656
Length adjustment: 9
Effective length of query: 248
Effective length of database: 647
Effective search space: 160456
Effective search space used: 160456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
