CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCTAGAGGCCCCTCTTTGCATGGAAGCTGACTGTAATGATCTATAGA
TACTTCTTCAGAGGATGCTTTTGCAGCTGTTTAGATGAGTTAAGTTCCTC
AAAAGGTGTTGATAGTTTAATCCCTCTGGGTGGTACTTCATATGGAGAGA
CAGCAGGCTTTGCAACACACTCAAAGCTCTGACAAAGCTCTTGGATCTTA
GTCACCTTGCTCACACATGGGATGTGGTTAGAACAGATGTGGACCATGCT
TGCTTAAATGCACTTTTGTACTGAGGACAGCTTGCCACTGGCCATTGCCT
AATTAATGTTCAACACCCCTAATGAGTACCTATGAGTAGATGAGTATTCT
CATTTTTTTCACAAATTGATGCCTCTAGGCAGTGACAGAATGATAGCATG
ATAAACTCCAAAGCCTCAGGCAGAGACTTCATTTTGGATGGGCTGTGCAC
AGGGTGGCATGGTAGACTAATAATGGTAACACAGGCTATTAATAACAGTG
TGATGAAGCCTGTGGCTTCTCAGTTGGTCTAGGCTGCAACCTCACTCCAG
TGTTTTATCAGATTCCTTTAAAATTCTGCTCTACTTCATCATACTTCCCT
GAATTAAATGCACATATGCATCTCTTTCCATAAAACACAAT

ATGAACGTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCCTAAAGAAATTCAAAATATAATTACCAT
ATAACCCCAAGACTTTTCTGGGCATATAACGAAAGGAAATGAAGTCATCA
CCTTGCAGGGGTATCTGCACTCCCATATTTTTGACAGCTTTCTTCAAGGT
AGCTAACATGTGGAAACAGCTTAAATGCTGATCAATAGATGAATGAATTA
AAGTAATGGATGTATCTGTTTATCTTCTCTCTATATACTGTTCTATTAAC
CCACGTACACACATAACACACACATGCTTGAGTCTTATCAAGGAGGGAGA
GCTTCTTGTTGCCCTATTGGAAAACACGGTTCTAACTGAAACAAACCAGA
GATCCTCCCTTTGTCAGCGGCACATCATGTCTCTTCTATGTGGATTCTAA
ACAAAAACCACATCACATATGCACAGGCAGAGAATGAAGCCGTGCTTTCT
AGGCATCCCAGGCATGTGGAGGAAAGGGAAGATGAGCAGAGCTGGAGATG
AGGCATAGATGAGAGGAGAAAGACTAATGCACAGTGTACAGGGGCTGCCA
CAGGGCACAGGGTACTGCCACAGGGTACAGGGGCTGTTACAGTGTACAGG
GGCTGTCACAGTGTATTAGGGCTTTTCACAGGGTACATGGGGT

Query= MSMg01no052_b07.b1 MSMg01no052_b07.b1 CHROMAT_FILE:
MSMg01no052_b07.b1 PHD_FILE: MSMg01no052_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:35 2005
         (508 letters)



>mm_chr18_11309582_11310489
          Length = 908

 Score =  946 bits (489), Expect = 0.0
 Identities = 501/505 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctctagaggcccctctttgcatggaagctgactgtaatgatctatagatacttc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctagaggcccctctttgcatggaagctgactgtaatgatctatagatacttc 263

                                                                       
Query: 64  ttcagaggatgcttttgcagctgtttagatgagttaagttcctcaaaaggtgttgatagt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttcagaggatgcttttgcagctgtttagatgagttaagttcctcaaaaggtgttgatagt 323

                                                                       
Query: 124 ttaatccctctgggtggtacttcatatggagagacagcaggctttgcaacacactcaaag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttaatccctctgggtggtacttcatatggagagacagcaggctttgcaacacactcaaag 383

                                                                       
Query: 184 ctctgacaaagctcttggatcttagtcaccttgctcacacatgggatgtggttagaacag 243
            ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 384 ttctgacaaagctcttgggtcttagtcaccttgctcacacatgggatgtggtcagaacag 443

                                                                       
Query: 244 atgtggaccatgcttgcttaaatgcacttttgtactgaggacagcttgccactggccatt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atgtggaccatgcttgcttaaatgcacttttgtactgaggacagcttgccactggccatt 503

                                                                       
Query: 304 gcctaattaatgttcaacacccctaatgagtacctatgagtagatgagtattctcatttt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcctaattaatgttcaacacccctaatgagtacctatgagtagatgagtattctcatttt 563

                                                                       
Query: 364 tttcacaaattgatgcctctaggcagtgacagaatgatagcatgataaactccaaagcct 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttcacaaattgatgcctctaggcagtgacagaatgatagcatgataaactccaaagcct 623

                                                                       
Query: 424 caggcagagacttcattttggatgggctgtgcacagggtggcatggtagactaataatgg 483
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 624 caggcagagacttcattttggatgggctgtgcacagggtgtcatggtagactaataatgg 683

                                    
Query: 484 taacacaggctattaataacagtgt 508
           |||||||||||||||||||||||||
Sbjct: 684 taacacaggctattaataacagtgt 708


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no052_b07.g1 MSMg01no052_b07.g1 CHROMAT_FILE:
MSMg01no052_b07.g1 PHD_FILE: MSMg01no052_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:35 2005
         (459 letters)



>mm_chr18_11404125_11404983
          Length = 859

 Score =  826 bits (427), Expect = 0.0
 Identities = 451/459 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctaaagaaattcaaaatataattaccatataaccccaagacttttctgggcatataacg 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 cctaaagaaattcaaaatataattaccatatgaccccaagacttttctgggcatataacg 260

                                                                       
Query: 61  aaaggaaatgaagtcatcaccttgcaggggtatctgcactcccatatttttgacagcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 aaaggaaatgaagtcatcaccttgcaggggtatctgcactcccatgtttttgacagcttt 320

                                                                       
Query: 121 cttcaaggtagctaacatgtggaaacagcttaaatgctgatcaatagatgaatgaattaa 180
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 cttcaaggtagctaacatgtggaaacagtttaaatgctgatcaatagatgaatgaattaa 380

                                                                       
Query: 181 agtaatggatgtatctgtttatcttctctctatatactgttctattaacccacgtacaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 agtaatggatgtatctgtttatcttctctctatatactgttctattaacccacatacaca 440

                                                                       
Query: 241 cataacacacacatgcttgagtcttatcaaggagggagagcttcttgttgccctattgga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cataacacacacatgcttgagtcttatcaaggagggagagcttcttgttgccctattgga 500

                                                                       
Query: 301 aaacacggttctaactgaaacaaaccagagatcctccctttgtcagcggcacatcatgtc 360
           |||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct: 501 aaacacggttctaactgaaacaaaccagagattctccccttgtcagtggcacatcatgtc 560

                                                                       
Query: 361 tcttctatgtggattctaaacaaaaaccacatcacatatgcacaggcagagaatgaagcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttctatgtggattctaaacaaaaaccacatcacatatgcacaggcagagaatgaagcc 620

                                                  
Query: 421 gtgctttctaggcatcccaggcatgtggaggaaagggaa 459
           |||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 gtgctttctaggcatcgcaggcatgtggaggaaagggaa 659


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space:   381201
Effective search space used:   381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)