Query= MSMg01no060_h24.b1 MSMg01no060_h24.b1 CHROMAT_FILE:
MSMg01no060_h24.b1 PHD_FILE: MSMg01no060_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:14 2005
(312 letters)
>mm_chr18_74508700_74509411
Length = 712
Score = 559 bits (289), Expect = e-164
Identities = 303/309 (98%), Gaps = 3/309 (0%)
Strand = Plus / Minus
Query: 1 gaattccatttagcttttgcctccagtaggagaacaaggttacagcactctaaaacccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gaattccatttagcttttgcctccagtaggagaacaaggttacagcactctaaaacccct 305
Query: 61 gacggaataagaatgtcttcttttgttcactaaatcaagtccgtttatgctaaagaggtg 120
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 304 gagggaataagaatgtcttcttttgttcactaaaccaagtccgtttatgctaaagaggtg 245
Query: 121 ggttcctaggtagttagtttcaagacacattggtagttaccagttctcaggcagcccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggttcctaggtagttagtttcaagacacattggtagttaccagttctcaggcagcccagg 185
Query: 181 taggcattgaatccactatgtagttgaggatggccctgaattcctaatcctcttgcctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 taggcattgaatccactatgtagttgaggatggccctgaattcctaatcctcttgcctct 125
Query: 241 gtaagaccctgaccctccgtcagtggtacttacttcaggacgcccctgagtgagacatcg 300
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 124 gtaagaccctgaccctc---cagtggtacttacttcaggacgcccctgagtgagacattg 68
Query: 301 agacgcaga 309
|||||||||
Sbjct: 67 agacgcaga 59
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no060_h24.g1 MSMg01no060_h24.g1 CHROMAT_FILE:
MSMg01no060_h24.g1 PHD_FILE: MSMg01no060_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:14 2005
(425 letters)
>mm_chr18_74374040_74374864
Length = 825
Score = 762 bits (394), Expect = 0.0
Identities = 418/426 (98%), Gaps = 2/426 (0%)
Strand = Plus / Plus
Query: 1 atagccaaggctgtacctaaaccctgacttgagataaaaaatatattatgagtttgtaat 60
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 201 atagccaaggctgtacctaaaccctgacttgagataaaaaaga-attatgagtttgtaat 259
Query: 61 tttttt-aaaaaattaagtctacgtgtatagtcattcatgtttgtgtgcgcacagtgccc 119
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 260 ttttttaaaaaaattaagtctacgtgtgtagtcattcatgtttgtgtgcgcacagtgccc 319
Query: 120 ttggagaccagaagatggagtaggcttccgctggagcctgatttagtgttgtgagctgcc 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttggagaccagaagagggagtaggcttccgctggagcctgatttagtgttgtgagctgcc 379
Query: 180 tgatgtgggaactgaattcatgccctctgcaagaacactcttagtccctgagctctccct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgatgtgggaactgaattcatgccctctgcaagaacactcttagtccctgagctctccct 439
Query: 240 agacctccctgtttgtcctctcacccctccttccttcccctcccgtgtggtgtgtgtgtg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agacctccctgtttgtcctctcacccctccttccttcccctcccgtgtggtgtgtgtgtg 499
Query: 300 tgttactttactccagctatagctttagtgtggaagtcaaaaaccaccacacatgctgtt 359
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 500 tgttactttactccagctatagctttagtgtggaagtcaaaaaccactaaacatgctgtt 559
Query: 360 gtcagtccccacctcccgtcctcctgtatgagttctgggaatagaattctggctgccagg 419
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 560 gtcagtccccacctcccgtcctcctgtatgagttctgggaatagaattctggttgccagg 619
Query: 420 ctgggc 425
||||||
Sbjct: 620 ctgggc 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
