Query= MSMg01no066_c12.b1 MSMg01no066_c12.b1 CHROMAT_FILE:
MSMg01no066_c12.b1 PHD_FILE: MSMg01no066_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:51 2005
(484 letters)
>mm_chr18_89324175_89325058
Length = 884
Score = 760 bits (393), Expect = 0.0
Identities = 402/405 (99%)
Strand = Plus / Minus
Query: 5 gaattcttgtaatacacaaacttgctagagaccaagcagacatgggccatagagaagtct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gaattcttgtaatacacaaacttgctagagaccaagcagacatgggccatagagaagtct 346
Query: 65 gttttccctaaattttgatagcaaaccttcaccaaattttgtagctcaaggttatcagtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gttttccctaaattttgatagcaaaccttcaccaaattttgtagctcaaggttatcagtt 286
Query: 125 gtgatattcaggttttacacattcctttttatgtatttccaccttgatgtgtaagttgca 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 285 gtgatattcaggttttacacattcctttttatgtatttccaccttgatgtgtaagttgta 226
Query: 185 aatacttcattctttcctcaaacttgggagggtgagataggagggcaccagttcaaggcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 aatacttcattctttcctcaaacttgggagggtgagataggagggcaccagttcaaggcc 166
Query: 245 atattaagctatagtgcgagacttacctaaaaaaataaagtattgataaaatgactccaa 304
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 165 atattaagctatagtgcgagacttacctaaaaaaataaagtagtgataaaatgactccaa 106
Query: 305 acaatactctgctatactcatggaccattgccttattcagccatcattaaagaagcttcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 acaatactctgctatactcatggaccattgccttattcagccatcattaaagaagcttcc 46
Query: 365 tcctgcagccgatgggaacaaaatcagatacccattgccagacat 409
|||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 45 tcctgcagccgatgggaacaaaatcagagacccattgccagacat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_c12.g1 MSMg01no066_c12.g1 CHROMAT_FILE:
MSMg01no066_c12.g1 PHD_FILE: MSMg01no066_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:51 2005
(530 letters)
>mm_chr18_89177978_89178907
Length = 930
Score = 1019 bits (527), Expect = 0.0
Identities = 530/531 (99%), Gaps = 1/531 (0%)
Strand = Plus / Plus
Query: 1 catcttaaaaggagaacacaaatcaatttctgctcaaataaattaagttggaattgaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcttaaaaggagaacacaaatcaatttctgctcaaataaattaagttggaattgaatt 260
Query: 61 agtgttatactgtttcatgtgtagttattaatccctgcattgcatgcttatatatgtcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgttatactgtttcatgtgtagttattaatccctgcattgcatgcttatatatgtcag 320
Query: 121 agaaaaagtttctgtcctcaggagtgtgttggcttcattctttacttcatagaagtggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaaaagtttctgtcctcaggagtgtgttggcttcattctttacttcatagaagtggtg 380
Query: 181 taattctgggtataagaggacaaaagtaaccaatctcccagactgggacaaggaggccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taattctgggtataagaggacaaaagtaaccaatctcccagactgggacaaggaggccat 440
Query: 241 atttggacttgagacattttgggcagagagaaattgaattgaagaaaacatgatatgttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttggacttgagacattttgggcagagagaaattgaattgaagaaaacatgatatgttg 500
Query: 301 atgtgatggaaaatacaactttcttgtgaaaaaaatccatagatttttgatagagaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtgatggaaaatacaactttcttgtgaaaaaaatccatagatttttgatagagaatta 560
Query: 361 ataagataggctcaactaacattatagtatacagtttgttttttttt-aaacaaatatta 419
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 ataagataggctcaactaacattatagtatacagtttgttttttttttaaacaaatatta 620
Query: 420 gaaaatattaacttaatattttttttcttcatcaaggcgagtgagtttttgccagagtcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaaatattaacttaatattttttttcttcatcaaggcgagtgagtttttgccagagtcc 680
Query: 480 atgtcagcagcattattttttgtctccttggacatgcctatttctttggaa 530
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgtcagcagcattattttttgtctccttggacatgcctatttctttggaa 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
