Query= MSMg01no066_d07.b1 MSMg01no066_d07.b1 CHROMAT_FILE:
MSMg01no066_d07.b1 PHD_FILE: MSMg01no066_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:55 2005
(281 letters)
>mm_chr18_81315013_81315693
Length = 681
Score = 350 bits (181), Expect = e-101
Identities = 258/297 (86%), Gaps = 25/297 (8%)
Strand = Plus / Minus
Query: 5 ggaattctacacagcatatcctgtcctcatccttgccatctcagacatgacccacaattt 64
|||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 372 ggaattctacacagcagatcgtgtcctcatccctgccatctcagacatgacccacaattt 313
Query: 65 gtcccaaagcagttttaaatttttaataaaatgcaattgcatctctccctctcttccccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gtcccaaagcagttttaaatttttaataaaatgcaattgcatctctccctctcttccccc 253
Query: 125 caaccccctccatctcacacccgttgcttgcctctctctctctctctc------------ 172
|||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 252 caaccccctccatctcacactcgttgcttgcctctctctctctctctctctctctctctc 193
Query: 173 ------catatgtatatatacatatatatatatatgtatacacacac--acacacaaaca 224
||||||||||||||||||||||||||| ||||| | | | | | ||| ||
Sbjct: 192 tctctccatatgtatatatacatatatatatat--gtatatatatatgtatataca--ca 137
Query: 225 cacacacatatatatatacacatatatgtgtgtgtgtatgtgtggtgtg-ggtgtgg 280
|||||||||||||||| ||| |||||||||||||||| || |||||||| |||||||
Sbjct: 136 cacacacatatatatacacatatatatgtgtgtgtgtgtgagtggtgtgtggtgtgg 80
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no066_d07.g1 MSMg01no066_d07.g1 CHROMAT_FILE:
MSMg01no066_d07.g1 PHD_FILE: MSMg01no066_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:55 2005
(434 letters)
>mm_chr18_81230510_81231343
Length = 834
Score = 816 bits (422), Expect = 0.0
Identities = 431/434 (99%)
Strand = Plus / Plus
Query: 1 tgtggtttgagtggaattgaacagtaagtccttttttttagccttttgacccaaacggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtggtttgagtggaattgaacagtaagtccttttttttagccttttgacccaaacggtg 260
Query: 61 tgtttgtgaaatgaagatatgaaggcgtggtaaatgcagtcaagaaatgacacacacttt 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtttgtgaaatgaagatatgaaggtgtggtaaatgcagtcaagaaatgacacacacttt 320
Query: 121 taggaatgtttgcagaacattggggtttgtttgtttttctgagtcagagtcttgggtagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggaatgtttgcagaacattggggtttgtttgtttttctgagtcagagtcttgggtagc 380
Query: 181 ctcaactggcctggaatttgttatatagttgaggaagaccttgaatttctgatctacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 ctcaactggcctggaatttgttatatagttgaggaagaccttgaatttctgatctgcctg 440
Query: 241 cttctgcctctcaggtgctaagattgtaggcaggcaacaccatacctggctcattatagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttctgcctctcaggtgctaagattgtaggcaggcaacaccatacctggctcattatagg 500
Query: 301 acaattttactaaagaaactaagtttctttaagatatactttacattttatgaatgtttg 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 acaattttactaaagaaactaagtttctttaagatatactttaaattttatgaatgtttg 560
Query: 361 cacacgaagaacaggaactattttataggaaatattaactattccttccctataagcctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacacgaagaacaggaactattttataggaaatattaactattccttccctataagcctg 620
Query: 421 cagttggaaataga 434
||||||||||||||
Sbjct: 621 cagttggaaataga 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
