Query= MSMg01no067_n11.b1 MSMg01no067_n11.b1 CHROMAT_FILE:
MSMg01no067_n11.b1 PHD_FILE: MSMg01no067_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:04 2005
(631 letters)
>mm_chr18_3796362_3797392
Length = 1031
Score = 1160 bits (600), Expect = 0.0
Identities = 621/628 (98%)
Strand = Plus / Plus
Query: 4 ggaattcaatatctatgaccaaaaacagcaaaatgatataaggaagcactgaaagcagaa 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaatatctaggatcaaaaacagcaaaatgatataaggaagcactgaaagcagaa 263
Query: 64 agacaatcccccaagacgtagtcttgggctttgaaagaacctgttcagtcatctccatcc 123
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 264 agacaatcccccaagaagtagtcttgggctttgaaagaacctgttcggtcatctccatcc 323
Query: 124 tattgtacatctcccatatactgctgagcaattgcagcaaaacccatgaagatgcattaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tattgtacatctcccatatactgctgagcaattgcagcaaaacccatgaagatgcattaa 383
Query: 184 acggacgttggtttaaagctcagatcttaatatagcaaagaaggagaatgacatctcctt 243
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acggacattgatttaaagctcagatcttaatatagcaaagaaggagaatgacatctcctt 443
Query: 244 caactggcagggagctattagagtcatcctactcagttaggtaatccaattttcctcacc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caactggcagggagctattagagtcatcctactcagttaggtaatccaattttcctcacc 503
Query: 304 aaaacaaggttgtttttcagcctgtactgaggctgctgagaagttggcagagagttttaa 363
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 504 aaaacaaggttgtttttcagcctgtactgagggtgctgagaagttggcagagagttttaa 563
Query: 364 gacaaatacttgggaccccaatcattgcgaatgacttagcttttaaaatgactttctagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gacaaatacttgggaccccaatcattgcgaatgacttagcttttaaaatgactttctagg 623
Query: 424 atgaatccttcattcagaggaacactatttttccagcatgcaaaattacctctaaatgac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgaatccttcattcagaggaacactatttttccagcatgcaaaattacctctaaatgac 683
Query: 484 acatgttggactttttatgttcaaagaaagctcctctgtagctaggctttgggatcagta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acatgttggactttttatgttcaaagaaagctcctctgtagctaggctttgggatcagta 743
Query: 544 agtctctgaacaaagtcatgactttttctaaagtctctacacttaaatattgggttatgt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agtctctgaacaaagtcatgactttttctaaagtctctacacttaaatattgggttatgt 803
Query: 604 ttcgatggtgtttaaggtacatctgtac 631
||||||||||||||||||||||||||||
Sbjct: 804 ttcgatggtgtttaaggtacatctgtac 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no067_n11.g1 MSMg01no067_n11.g1 CHROMAT_FILE:
MSMg01no067_n11.g1 PHD_FILE: MSMg01no067_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:04 2005
(288 letters)
>mm_chr18_3860216_3860903
Length = 688
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%)
Strand = Plus / Minus
Query: 1 cagaactgcagatatgtgctaccacacccagctttcctgtaagtactacgatctgaactc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 602 cagaactgcagatatgtgctaccacacccagctttcctgtaagtactaggatctgaactc 543
Query: 61 aggtcctcaggctttcgtggtgaagcatgtcacccactgagccatgtccccatcctcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aggtcctcaggctttcgtggtgaagcatgtcacccactgagccatgtccccatcctcagg 483
Query: 121 cctgaaatctgcactgttacaacatcctgatgctttctttgaaaattcaagctgtttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cctgaaatctgcactgttacaacatcctgatgctttctttgaaaattcaagctgtttgaa 423
Query: 181 agtcatcctgtcttgtttacacaaaggaaccatctggagctgtaagaaacagaaagcaga 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 422 agtcatcctgtcttgtttacacaaaggaaccatctggagccgtaagaaacagaaagcaga 363
Query: 241 atctgcatgggatggagaatatttgtctagatgtctagaggagtg 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atctgcatgggatggagaatatttgtctagatgtctagaggagtg 318
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
