Query= MSMg01no073_e03.b1 MSMg01no073_e03.b1 CHROMAT_FILE:
MSMg01no073_e03.b1 PHD_FILE: MSMg01no073_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:16 2005
(653 letters)
>mm_chr18_72522825_72523877
Length = 1053
Score = 1216 bits (629), Expect = 0.0
Identities = 644/649 (99%)
Strand = Plus / Minus
Query: 5 gaattctataagaaaagaaaaatcccaagtttctcatggatcagggcaaggagttgtgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 gaattctataagaaaagaaaaatcccaagtttctcatggatcagggcaaggagttgtgcc 794
Query: 65 ttctatgatgctttacaaggtgaagtcagaaacaagaaattattcaattaagcctctgta 124
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ttctacgatgctttacaaggtgaagtcagaaacaagaaattattcaattaagcctctgta 734
Query: 125 gttcactgctgtagcaacaaataggctattttggaagcagttctccagactctgaaggag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gttcactgctgtagcaacaaataggctattttggaagcagttctccagactctgaaggag 674
Query: 185 tattccctcagtaccagtgaacagagttgtgccaaagtaccaattttcaagagtattcaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tattccctcagtaccagtgaacagagttgtgccaaagtaccaattttcaagagtattcaa 614
Query: 245 ctgcagaaatgacacttctctatgtgcaaaagaacctgcctttgttatttgctgagctag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ctgcagaaatgacacttctctatgtgcaaaagaacctgcctttgttatttgctgagctag 554
Query: 305 agggaaagctcctttctcattttggaaatcaataaagctttttcttctattccatgagtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agggaaagctcctttctcattttggaaatcaataaagctttttcttctattccatgagtt 494
Query: 365 attatagaaaatgctacccatgttccagaagatgacttgtagaagacaattactaagctg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 attatagaaaatgctacccatgttccagaagatgacttgtagaagacaattactaagctg 434
Query: 425 gatctagctctgctctccttgtggacagctgtttctaggctctggagtgttgatttgaaa 484
|| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 433 gagctagctctgctctccttgtggacagccgtttccaggctctggagtgttgatttgaaa 374
Query: 485 gctctgaagaacatgcattcatgattctaggcagaggtatcccagctattataaagagtt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gctctgaagaacatgcattcatgattctaggcagaggtatcccagctattataaagagtt 314
Query: 545 tacaatgtagatatttaaggtattttgttctagagaccaggctaagttcccctgtgattg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tacaatgtagatatttaaggtattttgttctagagaccaggctaagttcccctgtgattg 254
Query: 605 atttctcataccagataatcaccagaatcccatttgaacagaagtttga 653
||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 253 atttctcataccagataatcaccagaatcccgtttgaacagaagtttga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_e03.g1 MSMg01no073_e03.g1 CHROMAT_FILE:
MSMg01no073_e03.g1 PHD_FILE: MSMg01no073_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:16 2005
(606 letters)
>mm_chr18_72370808_72371814
Length = 1007
Score = 996 bits (515), Expect = 0.0
Identities = 573/603 (95%), Gaps = 19/603 (3%)
Strand = Plus / Plus
Query: 1 tacagaaacacagcagatatcaaatggggttcccttcatgcatacccttctcccttctat 60
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 tacagaaacgcagcagatatcaaatggggttaccttcatgcatacccttctcccttctat 260
Query: 61 ctaggatcgtcccatagcaaaggtagtaagttctctgtgcactccgtattcagtcaccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaggatcgtcccatagcaaaggtagtaagttctctgtgcactccgtattcagtcaccag 320
Query: 121 tcctcgtcttgcattattacatcaaataatattgtagaagcagaacaagagcactaatag 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctcgtcttgcattcttacatcaaataatattgtagaagcagaacaagagcactaatag 380
Query: 181 ggaagaaggaagcagcacacattgcctttgcttctagtttctggttccactcaagttctg 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaagaagcaagcagcacacattgcctttgcttctagtttctggttccactcaagttctg 440
Query: 241 attcattatgttttt-ctgaaggttgtttcacaaaaaaaaaataaaaataaaacaaaaaa 299
||||||||||||||| |||||||||| ||| ||||||||||| |||
Sbjct: 441 attcattatgttttttctgaaggttgcttcgcaaaaaaaaaa---------------aaa 485
Query: 300 aacccacttaatgcacttaatgagcaatttctagtcatgaattttttaaaaaaaatatta 359
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 486 aacccacttaatgcacttaatgagcaatttctagtcatgaattt---aaaaaaaatatta 542
Query: 360 gagataagataattaaggggtactggagcattagaaagaatttggctaaccaaacttgaa 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gagataagataattaaggggtactggagcattagaaagaatttggctaaccaaacttgag 602
Query: 420 tcttaagaaagaaacagggctgaggaaacacagttacattagaagaaatcaactgaaaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tcttaagaaagaaacagggctgaggaaacacagttacattagaagaaatcaactgaaaat 662
Query: 480 agatacaccagcaatttcactgaaacattttttttgcctctttgttctcaaagataagat 539
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 acatacaccagcaatttcactgaaacattttttttgcctctttgttctcaaagataagat 722
Query: 540 gatgcatggttcactctttttagataaacactggaaactgaaatagataagcaagttgta 599
||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gatgcatggttgactctgtgtagataaacactggaaactgaaatagataagcaagttgta 782
Query: 600 ttt 602
|||
Sbjct: 783 ttt 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1007
Length adjustment: 10
Effective length of query: 596
Effective length of database: 997
Effective search space: 594212
Effective search space used: 594212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|