Query= MSMg01no073_p15.b1 MSMg01no073_p15.b1 CHROMAT_FILE:
MSMg01no073_p15.b1 PHD_FILE: MSMg01no073_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:12 2005
(599 letters)
>mm_chr18_51589687_51590685
Length = 999
Score = 644 bits (333), Expect = 0.0
Identities = 357/365 (97%)
Strand = Plus / Minus
Query: 6 gaattctcatgctattctctaatacaggccttttgtattttgcttttgagttttatttcc 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gaattctcatgctagtctctaatacaggccttttgtattttgcttttgagttttatttcc 509
Query: 66 aagatctaagtaaagtgttcttataaaaaacaaagaaacaaagggaaaaaaaacccagac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aagatctaagtaaagtgttcttataaaaaacaaagaaacaaagggaaaaaaaacccagac 449
Query: 126 ttttcacacagcatctcattactaccaagtaactggaacaaatgcttcaacctgaagcat 185
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttttcatacagcacctcattactaccaagtaactggaacaaatgcttcaacctgaagcat 389
Query: 186 ttgtaaactttgtaacatgtatttttcaagaagtaactgacctcagcttctctattgtat 245
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 388 ttgtaaactttgtaacatgtacttttcaagaactaactgacctcagcttctctattgtat 329
Query: 246 gggaatctataccagaatcaactgtaagagtaaaatgtaccttaattcctagctgaggtt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gggaatctataccagaatcaactgtaagagtaaaatgtaccttaattcctagctgaggtt 269
Query: 306 tgcataattaaactctaaaagaccataacaagtaggtgcaaatgacagttagaaagacaa 365
||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct: 268 tgcataattaaactctaaaagaccataaccagtagttgcaaataacagttagaaagacaa 209
Query: 366 aacaa 370
|||||
Sbjct: 208 aacaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_p15.g1 MSMg01no073_p15.g1 CHROMAT_FILE:
MSMg01no073_p15.g1 PHD_FILE: MSMg01no073_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:12 2005
(331 letters)
>mm_chr18_51428233_51428966
Length = 734
Score = 611 bits (316), Expect = e-179
Identities = 329/334 (98%), Gaps = 3/334 (0%)
Strand = Plus / Plus
Query: 1 tctttaacctctac-aatcttcctacatcatgtttccttggggaaactatgagaacacta 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttaacctctacaaatcttcctacatcatgtttccttggggaaactatgagaacacta 260
Query: 60 a--cttttttttttcaaaatttacgtttaatataatttaaaaaagaagagctcttatgct 117
| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actcttttttttttcaaaattcacgtttaatataatttaaaaaagaagagctcttatgct 320
Query: 118 cttgcctctctcttgcccccttacttcccattcccttcccccctctctccatgtgccatg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgcctctctcttgcccccttacttcccattcccttcccccctctctccatgtgccatg 380
Query: 178 gtcagcccctgcttctctactctctccttctctctgcctttctctgcctctgctaccctc 237
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcagcccctgcttctctactctcaccttctctctgcctttctctgcctctgctaccctc 440
Query: 238 ttaactccctccacatgtcctaaataaactctgttctatactaaaaatcataaaaataaa 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaactccctccacatgtcctaaataaactctgttctatactaaaaatcataaaaataaa 500
Query: 298 gaaaaagaagaagaaggaggaggaggaggaggag 331
||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaaaagaagaagaaggaggaggaggaggaggag 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 734
Length adjustment: 9
Effective length of query: 322
Effective length of database: 725
Effective search space: 233450
Effective search space used: 233450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
