Query= MSMg01no074_c23.b1 MSMg01no074_c23.b1 CHROMAT_FILE:
MSMg01no074_c23.b1 PHD_FILE: MSMg01no074_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:28 2005
(326 letters)
>mm_chr18_65117591_65118318
Length = 728
Score = 518 bits (268), Expect = e-151
Identities = 308/322 (95%), Gaps = 5/322 (1%)
Strand = Plus / Minus
Query: 9 gaattctttctaagttcccatgaggaagaagtaactgggcaaagaa-ttcaaaggctggt 67
||||||||||||||| || |||||||||||||||||||||| |||| |||||||||||||
Sbjct: 403 gaattctttctaagtgcctatgaggaagaagtaactgggcacagaagttcaaaggctggt 344
Query: 68 gaaccaacagtgttcgcgcgtcttctactatattagctgttcacgccacagccaccaaca 127
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gaaccaacagtgggcgtgcgtcttctactatattagctgttcacgccacagccaccaaca 284
Query: 128 gacagccctgaacggatgggct-aagagagccatatatgagcttgttgcatacaaatctt 186
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 283 gacagccctgaacggatgggctgaagagagccatatatgagcttgttgcatacaaatctt 224
Query: 187 aagagcttgttacaagaggctggcgagacggcttggtggttaacagcacctgtgctcctc 246
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 223 aagagcttgttacaagaggctggccagacggcttggtggttaacagcacctgcgctcctc 164
Query: 247 caagagtttggttcccataatctacgtcaggcacctcact--ataacctgtgtaactcta 304
|||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 163 caagagtttggttcccataatctacgtcaggcacctca-taaaaaacctgtgtaactcta 105
Query: 305 gtccaagggatccaactcctga 326
||||||||||||||||||||||
Sbjct: 104 gtccaagggatccaactcctga 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 728
Length adjustment: 9
Effective length of query: 317
Effective length of database: 719
Effective search space: 227923
Effective search space used: 227923
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_c23.g1 MSMg01no074_c23.g1 CHROMAT_FILE:
MSMg01no074_c23.g1 PHD_FILE: MSMg01no074_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:28 2005
(157 letters)
>mm_chr18_64970555_64971111
Length = 557
Score = 304 bits (157), Expect = 2e-87
Identities = 157/157 (100%)
Strand = Plus / Plus
Query: 1 acctcttggtcaaaggaggaagccaatggaaggaagatgcctagcaacagcagaagggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctcttggtcaaaggaggaagccaatggaaggaagatgcctagcaacagcagaagggtg 260
Query: 61 ggatgcggatggtttccaagtaactggcagcatccaccatgtgagcagccatgttttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatgcggatggtttccaagtaactggcagcatccaccatgtgagcagccatgttttcca 320
Query: 121 tagtccttcctacagaccccaccctggctgagattta 157
|||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtccttcctacagaccccaccctggctgagattta 357
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 557
Length adjustment: 8
Effective length of query: 149
Effective length of database: 549
Effective search space: 81801
Effective search space used: 81801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
