ACTTCCCGTATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCCAGGACTGCCAGGGCTATACAGAGAAACCCTGTCTT
AAAAAATCAACAAAACAAAACAAAACAAAACAAACAAACAAACAAAAAAA
CAAACTAAAACAAAACAAAACAAAACAAAACAAAACAAAAAAACACCCCA
AAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACC
AAACCAAACCAAACCAAACCAAACCAAACCAAACCAAAGAAACCCATACA
CGTTGAGTCCTTATATACTGAACTGCCATTTGGCTGCTATGTAAAAACAA
AGAAGCTTTACTTTCTTTTGTTTGTAACCTCAGCCAATTACAGGATACCC
CTCTCCAAGCTGATCTGCAAGTAAAAGCATCCATTTTACTGACTGTAAAT
CCTGTTTGCCCAAGTTCCCTGAAATTTTCTGAACTTTGTCTGGTTCAAGG
CTAGCCCCTCCCCATGGTTTGTTAAATTTATTTAAAGCTTTGCTCTGAAA
ACTACAAACCCAAATTCTAAACATTTTTTTTTCTACTTGCTCAATTCTTA
AAGTTCTCCGAGTGTCTTATACATGCTAAAGGCTTTTTTTTTTCTCTCAT
TAAAATGTATTTCCCTAGAGCCCCAGCAAAGGGAAATG

NNTTTTNNNNNNTTTTTTTTTTTTNTTTNTTCCCNTTTNNNNNNNTTGAA
NNNNTTAACGAGACATGAGATCCTGTGGCCGCTGTTGTCGACCTTTATGA
GACCTATATAACTTCCTGCTGCACATCCCCTTCTCTGGATCTAAATGTGA
CACAACTGCCTGTACGAGATGCACTTACCGCCTCGCTTGACTTCCAGATA
TAGTCCCGCTGACCCCAGTTCTAGTTCTTAACACTTTGCTAATTCTTCCC
CTTCGCTTTCACTCCACTCACACACGCTCAACAAGCACAATCTACTGCAT
GAGGGACTCACATCCCGCTGGAGCCCCAGACGGGCTGTCCCCGTATCTCC
ACTAGCTAATCTCGCCTATGCACGCTTTCGCCAACTCCCCCGGCTTGTAA
ACAACCCTAATTTTTTTTTTTTCTCCCCAGCCTCCCCTCCCTACTAAAGA
CCATGATTGACTTCCTCCTAACTCCAAAACACAGAATCGCCTTACTGCGC
GCTGTTCCCTCTCTCCCTTATACACCACTCCAATCTTCACCAAAGGACCC
CCCATTCCACTCCCTCCCGCCTTGCCCCTTTTAACCTAGTACCCACCTCG
ACCCTCCTTCATTCTACCACCTTCTCGCCCCCCATCCTTTAACTCTCTAC
CTTCCTTTATTACTATTTCCCTGCACCCGCTCCTGTCCTCCCTTCCCTAC
CCCCCCCCCCCCACCCTCTTCACTCAACCCCCCTCAATTTTTAACCCTTA
ACCCCTTCCCATCACTTCCCCTCATTCCACTTG

Query= MSMg01no075_j18.b1 MSMg01no075_j18.b1 CHROMAT_FILE:
MSMg01no075_j18.b1 PHD_FILE: MSMg01no075_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:19 2005
         (505 letters)



>mm_chr18_20763689_20764593
          Length = 905

 Score =  741 bits (383), Expect = 0.0
 Identities = 457/503 (90%), Gaps = 43/503 (8%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaggactgccagggctatacagagaaaccctgtcttaaaaaatcaacaaaacaa 64
           |||||||||||| ||||||||||||||||||||||||||||||||||| |  |  |||||
Sbjct: 896 gaattccaggacagccagggctatacagagaaaccctgtcttaaaaaa-c--c--aacaa 842

                                                                       
Query: 65  aacaaaacaaaacaaacaaacaaacaaaaa-aacaaactaaaacaaaacaaaac-aaaac 122
           |||||||||||||||||||||||| ||||| ||| |||  ||| ||||| |||| |||||
Sbjct: 841 aacaaaacaaaacaaacaaacaaa-aaaaacaac-aac--aaa-aaaac-aaactaaaac 788

                                                                       
Query: 123 aaaacaaaacaaaaaaacaccccaaaaccaaaccaaaccaaaccaaaccaaaccaaacca 182
           ||||||||||||||||||||||||                              ||||||
Sbjct: 787 aaaacaaaacaaaaaaacacccca------------------------------aaacca 758

                                                                       
Query: 183 aaccaaaccaaaccaaaccaaaccaaaccaaaccaaaccaaaccaaaccaaagaaaccca 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 aaccaaaccaaaccaaaccaaaccaaaccaaaccaaaccaaaccaaaccaaagaaaccca 698

                                                                       
Query: 243 tacacgttgagtccttatatactgaactgccatttggctgctatgtaaaaacaaagaagc 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tacacgttgagtccttatatactgaactgccatttggctgctatgtaaaaacaaagaagc 638

                                                                       
Query: 303 tttactttcttttgtttgtaacctcagccaattacaggatacccctctccaagctgatct 362
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 cttactttcttttgtttgtaacctcagccaattacaggatacccctctccaagctgatct 578

                                                                       
Query: 363 gcaagtaaaagcatccattttactgactgtaaatcctgtttgcccaagttccctgaaatt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 577 gcaagtaaaagcatccattttactgactgtaaatcctgtttgcccaagttccctggaatt 518

                                                                       
Query: 423 ttctgaactttgtctggttcaaggctagcccctccccatggtttgttaaatttatttaaa 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ttctgaactttgtctggttcaaggctagcccctccccatggtttgttaaatttatttaaa 458

                                  
Query: 483 gctttgctctgaaaactacaaac 505
           |||||||||||||||||||||||
Sbjct: 457 gctttgctctgaaaactacaaac 435


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space:   443025
Effective search space used:   443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)