Query= MSMg01no076_a21.b1 MSMg01no076_a21.b1 CHROMAT_FILE:
MSMg01no076_a21.b1 PHD_FILE: MSMg01no076_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:54 2005
(296 letters)
>mm_chr18_35861434_35862130
Length = 697
Score = 534 bits (276), Expect = e-156
Identities = 288/292 (98%), Gaps = 1/292 (0%)
Strand = Plus / Minus
Query: 6 gaattctcttgtgct-cattataacctttttatgggcaggagttggtctcacccgtacag 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gaattctcttgtgctaaattataacctttttatgggcaggagttggtctcacccgtacag 281
Query: 65 cacctgatatgtctagcccagtgtcttggctcatattagttctacacgtgttagtttatt 124
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 280 cgcctgatatgtctagcccagtgtcttggttcatattagttctacacgtgttagtttatt 221
Query: 125 taattagaaaaaatatttatttttatctttaattgtgtgtgtgtagcagcactatgtgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 taattagaaaaaatatttatttttatctttaattgtgtgtgtgtagcagcactatgtgaa 161
Query: 185 tgtgagttcaggtgccttcagaggctggaggtatcgaatctacctgaaactagagttata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tgtgagttcaggtgccttcagaggctggaggtatcgaatctacctgaaactagagttata 101
Query: 245 agaggtgtgagccatgtgggtgctggaaaccaaattcaggtacttagaagag 296
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 agaggtgtgagccatgtgggtgctggaaaccaaattcaggtacttagaagag 49
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 697
Length adjustment: 9
Effective length of query: 287
Effective length of database: 688
Effective search space: 197456
Effective search space used: 197456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no076_a21.g1 MSMg01no076_a21.g1 CHROMAT_FILE:
MSMg01no076_a21.g1 PHD_FILE: MSMg01no076_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:54 2005
(450 letters)
>mm_chr18_35697238_35698087
Length = 850
Score = 688 bits (356), Expect = 0.0
Identities = 374/380 (98%)
Strand = Plus / Plus
Query: 1 tcagactagacaagccaccctgttgtctgctataacacaggtttactcacagtacagtgt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tcagactagacaagccaccctgttgtctgctataacacaggtttactcccagtacagtgt 260
Query: 61 tgactctggttactattgcctggttattactcctctgtctcacacatttcaactagttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgactctggttactattgcctggttattactcctctgtctcacacatttcaactagttca 320
Query: 121 gaggttctcaacccggaagctgcaacccctcggggggggggggctccacatatcaaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gaggttctcaacccggaagctgcaacccctcggggggggggggctccacatatcagatat 380
Query: 181 cctgaatatcagatagtcacatgacaactcataacagtagcaaaattacagctataaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgaatatcagatagtcacatgacaactcataacagtagcaaaattacagctataaagt 440
Query: 241 agcagtggtataattttatggttgagggtcaccacaacctgagggactgtattaaagggt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcagtggcataattttatggttgagggtcaccacaacctgagggactgtattaaagggt 500
Query: 301 catagcatttagaagcttgaaagccaatgaactgaacaatatatattattttttaagaat 360
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 catagcatttagaagcttgagagccactgaactgaacaatatatattattttttaagaat 560
Query: 361 acacacacttatatatatat 380
|||||||| |||||||||||
Sbjct: 561 acacacacatatatatatat 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
