Query= MSMg01no076_g17.b1 MSMg01no076_g17.b1 CHROMAT_FILE:
MSMg01no076_g17.b1 PHD_FILE: MSMg01no076_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:23 2005
(150 letters)
>mm_chr18_10337813_10338362
Length = 550
Score = 277 bits (143), Expect = 3e-79
Identities = 146/147 (99%)
Strand = Plus / Plus
Query: 1 attccttccctggggaaaatgacagccaactatggatggtcctggggcttctggttctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attccttccctggggaaaatgacagccaactatggatggtcctggggcttctggttctat 260
Query: 61 agggtcatatgaagcatattcctcaagccatcactaatgcaataaaaattacacagtata 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagtcatatgaagcatattcctcaagccatcactaatgcaataaaaattacacagtata 320
Query: 121 atatgtaagggtatttgttctcttttc 147
|||||||||||||||||||||||||||
Sbjct: 321 atatgtaagggtatttgttctcttttc 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 150
Length of database: 550
Length adjustment: 8
Effective length of query: 142
Effective length of database: 542
Effective search space: 76964
Effective search space used: 76964
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no076_g17.g1 MSMg01no076_g17.g1 CHROMAT_FILE:
MSMg01no076_g17.g1 PHD_FILE: MSMg01no076_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:23 2005
(311 letters)
>mm_chr18_10500592_10501301
Length = 710
Score = 578 bits (299), Expect = e-169
Identities = 308/311 (99%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 1 tagacatggaattcctccaccatacctatcagggatcactggtctaactcctgagttact 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 510 tagacatggaattcctccaccatacctatca-ggatcactggtctaactcctgagttact 452
Query: 61 cagcaggttttcaggaacaatcacagtttcccctgcaaggacaggccgaggctggagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cagcaggttttcaggaacaatcacagtttcccctgcaaggacaggccgaggctggagaat 392
Query: 121 tccagttaatggtgtctggggaactggggtagataaaaggggctctggaaagaaaaagat 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tccagttaatggggtctggggaactggggtagataaaaggggctctggaaagaaaaagat 332
Query: 181 tgtttgacaagaaaaattaggcatggggctaattgaagaacttcagaaatcactgtagtt 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 331 tgtttgacaagaaaaattaggcatggggctaatttaagaacttcagaaatcactgtagtt 272
Query: 241 ttaatactttaaagagatggttttgaagtccaatagtttttgttttttaatttaacatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttaatactttaaagagatggttttgaagtccaatagtttttgttttttaatttaacatat 212
Query: 301 atattacagaa 311
|||||||||||
Sbjct: 211 atattacagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 710
Length adjustment: 9
Effective length of query: 302
Effective length of database: 701
Effective search space: 211702
Effective search space used: 211702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
