Query= MSMg01no078_e17.b1 MSMg01no078_e17.b1 CHROMAT_FILE:
MSMg01no078_e17.b1 PHD_FILE: MSMg01no078_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:35 2005
(365 letters)
>mm_chr18_66419908_66420672
Length = 765
Score = 661 bits (342), Expect = 0.0
Identities = 357/362 (98%), Gaps = 2/362 (0%)
Strand = Plus / Plus
Query: 5 ggaattcatctggaaccattttgcaacttaagaaaa-atctcagacatctaacagacgtc 63
||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 ggaattcatctggaa-aattttgcaacttaagaaaacatctcagacatctaacagacgtc 263
Query: 64 tgtctctatgggcctgcagactggagaccaaattcatacagtaaatatttttggtgaaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtctctatgggcctgcagactggagaccaaattcatacagtaaatatttttggtgaaac 323
Query: 124 tcaaaaaagagctgacgatttggacaactgagtaaatttgtaatgactcactagagatgt 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 324 tcaaaaaagagctgacgatttggacaactgagtaaatttgtaatgactcactagagatat 383
Query: 184 caggactctgttcacatgcattctgtttggaggttaaggatccagagactcaaatgtaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caggactctgttcacatgcattctgtttggaggttaaggatccagagactcaaatgtaca 443
Query: 244 cagcgcctgactcaaaagtagaggctcaataaatatttgttgaacaaaggaaagtttcag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cagcgcctgactcaaaagtagaggctcaataaatatttgttgaacaaaggaaagtttcag 503
Query: 304 ttaactctcattagccgactgctctgttggcaagacctttagttccttggagctttcctt 363
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 504 ttaactctcattagccgactgctctgttggcaagacctttaattccttggagctttcctt 563
Query: 364 tg 365
||
Sbjct: 564 tg 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_e17.g1 MSMg01no078_e17.g1 CHROMAT_FILE:
MSMg01no078_e17.g1 PHD_FILE: MSMg01no078_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:35 2005
(455 letters)
>mm_chr18_66572614_66573466
Length = 853
Score = 741 bits (383), Expect = 0.0
Identities = 434/451 (96%), Gaps = 2/451 (0%)
Strand = Plus / Minus
Query: 5 gaaatctttgttatttcttttctataaaggcacagttggtctattgaaaactcgttgggt 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gaaatctttg-tatttcttttctataaaggcacagttggtctattgaaaactcgttgggt 414
Query: 65 gctgggtatcaagttcaatatcattgcttttagttcttacgagcagatagaacaagaaaa 124
|||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 413 gctggggatcaagttcaatgtcattgcttttagttcttacgagcagacagaacaagaaaa 354
Query: 125 tatgtattatgaaactgtgcatacgtacctatctgtgacagagctgaggatatacatgtg 184
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 353 catgtattatgaaactgtgcatacgtacctatctgtgacagagct-aggatatacgtgtg 295
Query: 185 tgaacccccatctgatatctgcctgctcacattggtatcatctttccagttgccctttaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tgaacccccatctgatatctgcctgctcacattggtatcatctttccagttgccctttaa 235
Query: 245 ataaccctctggtacagtgacttattctccgtgtgtgcatgtgtgccacagtgtggaagt 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 234 ataaccctctggtacagtgacttattctccatgtgtgcatgtgtgccacagtgtggaagt 175
Query: 305 tggaaccacatttgtgggattctatccttccctttgcgcatcctgggttttgaactcagc 364
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 174 tggaaccacatttgtggggttctatccttccctttgtgcatcctgggtcttgaactcagc 115
Query: 365 tcattaggcctggccacaagtccttttattgacatagttgtctcacagctcttgctctct 424
|||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 114 tcattaggtctggcaacaagtccttctattgacagagttgtctcacagctcttgctctcc 55
Query: 425 tttgatactctccaggagtctggtcaatggg 455
||||||||||||||||||||||| |||||||
Sbjct: 54 tttgatactctccaggagtctggccaatggg 24
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 853
Length adjustment: 10
Effective length of query: 445
Effective length of database: 843
Effective search space: 375135
Effective search space used: 375135
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
