XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCA
CCTGACGAATACCGAATGGCAGAGAAGAACCCTGTTATCTATCCCAGTGA
GAGTTCGGATAGCAAGATGCTAGAAGATGGGAACAGGAAAGAAAGCGTTC
ACTGATAGCTTTTCGATCTGAGAGAAACTAGAGATCTGTAACTGGAATTG
AGAGGAAAGGATGGATTTTGAATTACAGGCAGAAGAAGGCACATCTGTGG
AGAAATGAAAGTGCAGAGTGGTTAGAACAAGGCATGTATGCTATAAGTGG
GGCAAGAAAGAGGACTTGGATAAACAGTTTAGCAGAATCAGGTGGTGTGC
TGTCGTTACTTCTAATTCCTAACAATGTTCTTTATAGGAAATCCAGTTAT
TTCTCCACTTGGAGCTTAGAAGAAATACAATCAAGTGTCCTCATCTGTTA
ATTTCCTGTCATAAAAGATGGTAACACATGAGTTTTATGATATATGATGT
GCTTGGGTAGAGAGAAAAGAGAATGGGAAACTCCTCTTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGGGGGGGTGC
TGATTCTGAGTCACATTTTGTTCTATTATTCTATGATCTGAGGTCATTTC
TTCATTCCTATCTTAAAAACAGTCTCACATCAACATCTAGTTCTTCCTGT
AAGGATC

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTTGTTTAGCTGTGAGCCCCATTTTTTAATGTGG
TTATTTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATACATAC
TATATATATATATATATATATATATATATATATAGTATGTATATATATAT
TGGATATTAGTCTCCTATCTGATATAGGATAGGTAAAGATCCTTTCCCAG
TCTGTTGGTGCCCTTTTTGTCTTGCTGATGATGCCGCTTGCCTTATAGAA
GCTTTGATATTTTATGAGGTCCCATTTGTCTATTCTAGAGCTAACGGCGC
AAGCCACCGCTGTTCTATTCAGGAATTTTCCCCTGTGCCCATATCTTTGA
GGCCCCCCCCCACTTTCTCCTCTATAAGCTTCTCTGCCTCTGATTCTATG
CGGACGCCCTTGCTCCTCTTAGACCTGACCTCAGCACCAGCCGCCGGGAA
TGTGACAGTTGGCCCCCTTCTACCTGAGGGCCTCCCGTTGCGCCTGTTGC
ATTTTGTCGCCATGCTGGCCTTTTTTCCTCTCGCATGCATTTAGTTCCTT
CGTCCCCTATTCCCGACCCCAGTACCCGGTTCTTTTCCTGTGGGCCCTTC
TTTCGCTCCCCTTGGTCTTTTCCCCCGCCTCTCCCGCCCCCCCCCCCCCG
CC

Query= MSMg01no079_i14.b1 MSMg01no079_i14.b1 CHROMAT_FILE:
MSMg01no079_i14.b1 PHD_FILE: MSMg01no079_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:11 2005
         (627 letters)



>mm_chr18_31032768_31033794
          Length = 1027

 Score = 1031 bits (533), Expect = 0.0
 Identities = 598/623 (95%), Gaps = 6/623 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcacctgacgaataccgaatggcagagaagaaccctgttatctatcccagtgag 64
           |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcacctgaggaatactgaatggcagagaagaaccctgttatctatcccagtgag 264

                                                                       
Query: 65  agttcggatagcaagatgctagaagatgggaacaggaaagaaagcgttcactgatagctt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 265 agttcggatagcaagatgctagaagatgggaacaggaaagaaagcgttccctgatagctt 324

                                                                       
Query: 125 ttcgatctgagagaaactagagatctgtaactggaattgagaggaaaggatggattttga 184
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 325 ttcgatctgagagaaactagagatctgtaactggaattgagaggaaaggatgcattttga 384

                                                                       
Query: 185 attacaggcagaagaaggcacatctgtggagaaatgaaagtgcagagtggttagaacaag 244
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 attacaggcagaagaaggcacatctgtggagaaatgaaagtgcagagttgttagaacaag 444

                                                                       
Query: 245 gcatgtatgctataagtggggcaagaaagaggacttggataaacagtttagcagaatcag 304
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcatgtatgctgtaagtggggcaagaaagaggacttggataaacagtttagcagaatcag 504

                                                                       
Query: 305 gtggtgtgctgtcgttacttctaattcctaacaatgttctttataggaaatccagttatt 364
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtggtgtgctgttgttacttctaattcctaacaatgttctttataggaaatccagttatt 564

                                                                       
Query: 365 tctccacttggagcttagaagaaatacaatcaagtgtcctcatctgttaatttcctgtca 424
           ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 565 tcttcacttggagcttagaagaaatacaatcaagtgtcctcatttgttaatttcctgtca 624

                                                                       
Query: 425 taaaagatggtaacacatgagttttatgatatatgatgtgcttgggtagagagaaaagag 484
           ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 625 taaaagatggtaacacatgagttttctgatatatgatgtacttgggtagagagaaaagag 684

                                                                       
Query: 485 aatgggaaactcctcttctctctctctctctctctctctctctctctctctctctctctc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||| | | | |   
Sbjct: 685 aatgggaaactcctcttctctctctctctctctctctctctctctctctgtgtgtgt--- 741

                                                                       
Query: 545 tctgtgtgtgggggggtgctgattctgagtcacattttgttctattattctatgatctga 604
              ||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||
Sbjct: 742 ---gtgtgtgggggggtgctgattctgagtcacattttgttctattattctaagaaatga 798

                                  
Query: 605 ggtcatttcttcattcctatctt 627
           ||||||| |||||||||||||||
Sbjct: 799 ggtcattacttcattcctatctt 821


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)