Query= MSMg01no079_o04.b1 MSMg01no079_o04.b1 CHROMAT_FILE:
MSMg01no079_o04.b1 PHD_FILE: MSMg01no079_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:38 2005
(613 letters)
>mm_chr18_10337699_10338711
Length = 1013
Score = 1077 bits (557), Expect = 0.0
Identities = 596/609 (97%)
Strand = Plus / Plus
Query: 5 gaattctcccctggccaggaaatgaatgccagaatgaagttcataggactttgttaggca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcccctgggcaggaaatgaatgccagaatgaagttcataggactttgttaggca 264
Query: 65 cctgtggctggaatgagaactgaaagagagagacagacacatgcagagtaattccttccc 124
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 265 cctgtggctggaatgagaactgtaagagagggacagacacatgcagagtaattccttccc 324
Query: 125 tggggaaaatgacagccaactatggatggtcctggggcttctggttctatagggtcatat 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 325 tggggaaaatgacagccaactatggatggtcctggggcttctggttctatagagtcatat 384
Query: 185 gaagcatattcctcaagccatcactaatgcaataaaaattacacagtataatatgtaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaagcatattcctcaagccatcactaatgcaataaaaattacacagtataatatgtaagg 444
Query: 245 gtatttgttctcttttccaacaccaaaattataagcgaatctaattaaagctgaaaccta 304
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtatttgttctcttttctaacaccaaaattataagcgaatctaattaaagctgaaaccta 504
Query: 305 atggagtttaaatatacctgcttttctatttttaaaaaaaattgcatttaagctttaaac 364
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 505 atggagtttaaatatacctgcttttctatttttttaaaaaattgcatttaagctttaatc 564
Query: 365 ttgtttctgaggcattggaacctgaagcaactggggtgatgctgaggctgaggagaaaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 565 ttgtttctgaggcattggaacctgaagcaactggggtgatgctgaggctgaggggaaaat 624
Query: 425 gctcagccaagctcttttacgtcactgatgcttcatagatactaaaactgtgacatgcat 484
|| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 625 gccctgccaagctcttttacgtcactgatgcttcatagatactaaagctgtgacatgcat 684
Query: 485 cctttggagaggggtaggaattgtgtatgcataggtaggtacatgtgtatgtatgcatgg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cctttggagaggggtaggaattgtgtatgcataggtaggtacatgtgtatgtatgcatgg 744
Query: 545 tgtatgtacatgtgtgtgggtgtgtacaggcaatggtgcaggggtggaggtcagaagaca 604
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 745 tgtatgtacatgtgtgtgggtgtgtacaggcagtggtgcaggggtggaggtcagaagaca 804
Query: 605 acttttagg 613
|||||||||
Sbjct: 805 acttttagg 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_o04.g1 MSMg01no079_o04.g1 CHROMAT_FILE:
MSMg01no079_o04.g1 PHD_FILE: MSMg01no079_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:38 2005
(636 letters)
>mm_chr18_10500609_10501644
Length = 1036
Score = 874 bits (452), Expect = 0.0
Identities = 476/488 (97%), Gaps = 7/488 (1%)
Strand = Plus / Minus
Query: 1 tagacatggaattcctccaccatacctatcaggatcactggtctaactcctgagttactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tagacatggaattcctccaccatacctatcaggatcactggtctaactcctgagttactc 434
Query: 61 agcaggttttcaggaacaatcacagtttcccctgcaaggacaggccgaggctggagaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agcaggttttcaggaacaatcacagtttcccctgcaaggacaggccgaggctggagaatt 374
Query: 121 ccagttaatggggtctggggaactggggtagataaaaggggctctggaaagaaaaagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ccagttaatggggtctggggaactggggtagataaaaggggctctggaaagaaaaagatt 314
Query: 181 gtttgacaagaaaaattaggcatggggctaattgaagaacttcagaaatcactgtagttt 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 313 gtttgacaagaaaaattaggcatggggctaatttaagaacttcagaaatcactgtagttt 254
Query: 241 taatactttaaagagatggttttgaagtccaatagtttttgttttttaatttaacatata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 taatactttaaagagatggttttgaagtccaatagtttttgttttttaatttaacatata 194
Query: 301 tattacagaaaattagaagaaaacagaaaaaaaa-------gaaacaaacaaatcaacca 353
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 193 tattacagaaaattagaagaaaacagaaaaaaaaaaaaaaagaaacaaacaaatcaacca 134
Query: 354 taatcacatcactgtagatgactactgagcattttggtaggtttagctttgtatttcata 413
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 133 taatcacatcactgtagatgactactgagcattttggtagatttaactttgtatttcata 74
Query: 414 tttaccaactccaagtaaccaaagatatggatttccatacataaagctgcaaacataaac 473
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 73 tttaccaactccaagtaaccaaagatatggatttccatacataaagctggaagcataaac 14
Query: 474 atgataga 481
||||||||
Sbjct: 13 atgataga 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
