TTGCGGCCGCTATACGACTCCTATNAGTTCCAGGATCCGCGGAATTCTCA
ATAGAGGATTCTCAAATGAAAAAAAAAGCACTTAAAGAAATGCTCAAAGT
CCTTAGTCATCAGGGAAATGCAAATCAAAACAATTCTGAGGTTCCATCTT
ACAGTTGTCAGAATGGCTAAGATCAAATACTTATGTGATAGCACTTGTGG
GGGAGAATTTGGAGCAGAGGGACTCTCCTCCTTTGCTGGTGGGAGTGCAA
ACTTGTACAACCACTTTGGAAATCAATTGGGCAGTTTCTCAGAAAACTGG
AAATAGTTCTACTTTAAGACCTAGCTATTCTCCTAGGCATATACCCAAAA
GATACCCCACTACCCCACAGGGATACTTGCTCAACTATGCTCATAGTATC
TTTATTATAACCAGAAACTGGAAATAACTTAGCTGTCCCTCAACTGAAGA
ATGGATAAGAAAACATAGTACATCTACAGAATGAAATACTATTCAGCTGC
TTAAAACAAAGGCATCATGAATTTTCAGGGAACTTGAGAATATTATCCTC
AGTGAGGTAACCCAGACCCCAAAGGACATGTATGGTATATACTCACTTAT
AAGTGGATATTAGATAAAAAAAATAAAGAATACCCATGCTACATTCCAGA
GACCCAAAAAGCTAAACAAAAGAAAGGTCCAGGAGAGGATACTTGAATCC
CACTTAGAAGAGAGAATAAAATAGTTAT

GTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTAAGCCTTCATTTCCTCTCATCTCAGCATACTCAG
AGGGTGGAAGCTTCAGCCCATAGAAGCAAATCAAAGTGACTAGATCACTC
CTTTATGGCATTCCAAGAGCTAGGACCCTCACACTGAACTGCTTTTCTAA
GGAGTTATTTAGTGATTTGATAAGAGGAGAGGAATCACATCAGGGATGCA
ACAGAAAATGAAAAAAGAGGTTTGAATATCTTGTTCCCCAAAACCAGAGT
TTGAGGAACTGTAGGGAATGCCAAGCCTAAAGGCACTCTTAAAAACAATC
TCTTTTCAATAATACATAATGCAACGCAATTCGTGAAAAATACATATTAT
AGACATAGTTTATCAAATAGAATTGAAAGAAGGAGAAAATAGATAAGAGA
CATTGAGGGCTGGAGAGATGGCTCACCCATTAAAGGCTTGGCTCACAACC
AAAAATATAAGAAGAGAAATTGAAATAAAATAAACTTCAAGCTGGCTTGA
AAAAAAATATCATGGGTAAAAAATGTTAGAAATAAGTTGAATAAAACAGT
GCAACAATTCTGATCCTAGGACATTGTAGAAAATGATGGAGCAATACTCA
GAAATAAGTGGAGTTAACATCTAGGTCATATCAGCAGTAGTTGGTTATTT
AAGATAACTATAAGGTACTAGAGTAAC

Query= MSMg01no079_p22.g1 MSMg01no079_p22.g1 CHROMAT_FILE:
MSMg01no079_p22.g1 PHD_FILE: MSMg01no079_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:46 2005
         (620 letters)



>mm_chr18_72803907_72804926
          Length = 1020

 Score = 1120 bits (579), Expect = 0.0
 Identities = 611/623 (98%), Gaps = 4/623 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taagccttcatttcctctcatctcagcatactcagagggtggaagcttcagcccatagaa 60
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 taagccttcatttcctctcatctcagcatactcagacggtggaagcttcagcccatagaa 260

                                                                       
Query: 61  gcaaatcaaagtgactagatcactcctttatggcattccaagagctaggaccctcacact 120
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaaatcaaagcgactagatcactcctttatggcattccaagagctaggaccctcacact 320

                                                                       
Query: 121 gaactgcttttctaaggagttatttagtgatttgataagaggagaggaatcacatcaggg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaactgcttttctaaggagttatttagtgatttgataagaggagaggaatcacatcaggg 380

                                                                       
Query: 181 atgcaacagaaaatgaaaaaagaggtttgaatatcttgttccccaaaaccagagtttgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcaacagaaaatgaaaaaagaggtttgaatatcttgttccccaaaaccagagtttgag 440

                                                                       
Query: 241 gaactgtagggaatgccaagcctaaaggcactcttaaaaacaatctcttttcaataatac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaactgtagggaatgccaagcctaaaggcactcttaaaaacaatctcttttcaataatac 500

                                                                       
Query: 301 ataatgcaacgcaattcgtgaaaaatacatattatagacatagtttatcaaatagaattg 360
           ||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 ataatgcgatgcaattcgtgaaaaatgcatattatagacatagtttatcaaatagaattg 560

                                                                       
Query: 361 aaagaaggagaaaatagataaga---gacattgagggctggagagatggctcacccatta 417
           |||||||||||||||||||||||   ||||||||||||||||||||||||||| | ||||
Sbjct: 561 aaagaaggagaaaatagataagaagagacattgagggctggagagatggctcagctatta 620

                                                                       
Query: 418 aaggcttggctcacaaccaaaaatataagaagagaaattgaaataaaataaacttcaagc 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaggcttggctcacaaccaaaaatataagaagagaaattgaaataaaataaacttcaagc 680

                                                                       
Query: 478 tggcttgaaaaaaaatatcatgggtaaaaaatgttagaaataagttgaataaaacagtgc 537
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggcttgaaaaaaa-tatcatgggtaaaaaatgttagaaataagttgaataaaacagtgc 739

                                                                       
Query: 538 aacaattctgatcctaggacattgtagaaaatgatggagcaatactcagaaataagtgga 597
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aacaattctgaccctaggacattgtagaaaatgatggagcaatactcagaaataagtgga 799

                                  
Query: 598 gttaacatctaggtcatatcagc 620
           |||||||||||||||||||||||
Sbjct: 800 gttaacatctaggtcatatcagc 822


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space:   616100
Effective search space used:   616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)