Query= MSMg01no080_f14.b1 MSMg01no080_f14.b1 CHROMAT_FILE:
MSMg01no080_f14.b1 PHD_FILE: MSMg01no080_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:13 2005
(328 letters)
>mm_chr18_51824804_51825532
Length = 729
Score = 574 bits (297), Expect = e-168
Identities = 318/325 (97%), Gaps = 1/325 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtgatgccctggtctccatccatcacttctcaggtctctcagtttttcattga 64
|||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 205 gaattctgtgatgctatggtctccatccatcacttctcaggcctctcagttttgcattga 264
Query: 65 tttcttgcctgac-atatattagagaagataggcgtctttaaagtatctttatgacttta 123
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 tttcttgcctgacaatatattagagaagataggtgtctttaaagtatctttatgacttta 324
Query: 124 aggcaattttagcatcagagatgcaatgctgcagtaatagtagatagtattaattatgtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggcaattttagcatcagagatgcaatgctgcagtaatagtagatagtattaattatgtt 384
Query: 184 ttcatcagaatatctcatattttaagtacccgatttctgtgagaatttactaaatataaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcatcagaatatctcatattttaagtacccgatttctgtgagaatttactaaatataaa 444
Query: 244 tatagtatgtgcttcattgtttggtaacatttctctggcaatgtatcaaaggttacctga 303
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatagtatgttcttcattgtttggtaacatttctctggcaatgtatcaaaggttacctga 504
Query: 304 gactccttggctttttcaggaagac 328
|||||||||||||||||||||||||
Sbjct: 505 gactccttggctttttcaggaagac 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 729
Length adjustment: 9
Effective length of query: 319
Effective length of database: 720
Effective search space: 229680
Effective search space used: 229680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_f14.g1 MSMg01no080_f14.g1 CHROMAT_FILE:
MSMg01no080_f14.g1 PHD_FILE: MSMg01no080_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:13 2005
(296 letters)
>mm_chr18_52001698_52002393
Length = 696
Score = 522 bits (270), Expect = e-153
Identities = 288/294 (97%)
Strand = Plus / Minus
Query: 1 actgttactgtgatattaactagaacctcattgaattgattattctgtcccaaaagtttt 60
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 494 actgttactgtgatgttaactagaacctcattgaattgattattctgtcccgaaagtttt 435
Query: 61 catactaaagataggatgatagtgaaaactttcctcacaaagtatctagtctattgaaga 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 434 catactaaagataggatgatagtgaaaactttcctcacaaagcatctagtctattgaaga 375
Query: 121 aggaagttcaaaaccaaaaaccataaaactgtgggcagcaggtgtgtcacaacattgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aggaagttcaaaaccaaaaaccataaaactgtgggcagcaggtgtgtcacaacattgtgt 315
Query: 181 gtccatcctgcatgaagatacaagggggcaggtgaattgctgggaaagaggtggcaggtt 240
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 314 gtccatcctgcattaagatacaaggggacaggtgaattgctgggaaagaggtggcaggtt 255
Query: 241 ttctttggtcactggaccactgcctctctatgctcaggagctgtttgtggtggg 294
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 254 ttctttggtcactggaccactgcctctctatgctcaggagctgattgtggtggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
