Query= MSMg01no080_l13.b1 MSMg01no080_l13.b1 CHROMAT_FILE:
MSMg01no080_l13.b1 PHD_FILE: MSMg01no080_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:43 2005
(344 letters)
>mm_chr18_78326343_78327083
Length = 741
Score = 532 bits (275), Expect = e-155
Identities = 307/319 (96%), Gaps = 3/319 (0%)
Strand = Plus / Minus
Query: 26 accaccctaccccctaccaagtctcaaggaactaagatgccttagtgcagattctgagtt 85
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 741 accaccctaccccctactaagtctcaaggaactaagatgtcttagtgcagattctgagtt 682
Query: 86 catatgcactcaagttccctggggatggagctgaaacgcaggttctgatttggaagtcct 145
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacatgcactcaggttccctggggatggagctgaaacgcaggttctgatttggaagtcct 622
Query: 146 gctggaactgaggaggccatgtccaccaagtccccgggagctgcagagccgctcggcggt 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctggaactgaggaggccatgtccaccaagtccccgggagctgcagagccgctcggcggt 562
Query: 206 ggacaacactttgcatagcaaggattgtgaagaaccttacccggaatgaatgaaaagaag 265
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 ggacgacactttgcatagcaaggattgtgaagaaccttacctggaatgaatgaaaagaag 502
Query: 266 cctccatccgtgcttcgtggggaggaggattggctactgagctaccattttgtcctcccc 325
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 cctccatccgtgcttcatggggagga---ttggctactgagctaccattttgtcctcccc 445
Query: 326 agcaagcccacacagtcct 344
|||||||||| |||||||
Sbjct: 444 agcaagcccatgcagtcct 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 741
Length adjustment: 9
Effective length of query: 335
Effective length of database: 732
Effective search space: 245220
Effective search space used: 245220
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_l13.g1 MSMg01no080_l13.g1 CHROMAT_FILE:
MSMg01no080_l13.g1 PHD_FILE: MSMg01no080_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:43 2005
(354 letters)
>mm_chr18_78185617_78186370
Length = 754
Score = 630 bits (326), Expect = 0.0
Identities = 349/360 (96%), Gaps = 6/360 (1%)
Strand = Plus / Plus
Query: 1 taggtcataggctcattggtgacagagagacttccttgtcagtgtctgcttcccattgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggtcataggctcattggtgacagagagacttccttgtcagtgtctgcttcccattgtc 260
Query: 61 ctggagctccttgcttccggttcccctgtgttcttttaggtggtccagcagacaaaaatg 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggagctccttgcttctggttcccctgtgttcttttaggtggtccagcagacaaaaatg 320
Query: 121 tgtttaaatctttttcagccctaacttcttttttttgtttgttttttgttttttcaagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttaaatctttttcagccctaacttcttttttttgtttgttttttgttttttcaagac 380
Query: 181 agggtttctctgtgtagccccggctgtcctggaactcactctgtagaccaggctgtcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 agggtttctctgtgtagccccggctgtcctggaactcactctgtagaccaggctggcctc 440
Query: 241 aaactcagaaatccgcctgcctctgcctcccaagtgctgggattaaaggcatgcgccacc 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 aaactcagaaatccgcctgcctctgcctcccaagtgctgggattaaaggcgtgcgccacc 500
Query: 301 actgcccggcttcttttttttttttttttt------ccacccctaacgactagtctgagt 354
|||||||||||||||||||||||||||||| ||| |||||||| |||||||||||
Sbjct: 501 actgcccggcttctttttttttttttttttttttttccagccctaacgtctagtctgagt 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
