Query= MSMg01no081_a24.b1 MSMg01no081_a24.b1 CHROMAT_FILE:
MSMg01no081_a24.b1 PHD_FILE: MSMg01no081_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:09 2005
(541 letters)
>mm_chr18_35515423_35516364
Length = 942
Score = 944 bits (488), Expect = 0.0
Identities = 524/542 (96%), Gaps = 13/542 (2%)
Strand = Plus / Minus
Query: 5 gaattctttatctgagc-cataaaaaatttcaacaagtgtattgagagatacttcttata 63
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gaattctttatctgagcaaataaaaaatttcaacaagtgtattgagagatacttcttata 647
Query: 64 ccatcaagttcactcatgaaaagtaaatgggaagaataattcccacacaccctagaaaga 123
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 646 ccatcaagttcactcatgaaaagtaaatggggagaataattcccacacaccctagaaaga 587
Query: 124 caggcagagtacaggggcagtttctagtctatggtgttccatggagcagaaaaacttcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 caggcagagtacaggggcagtttctagtctatggtgttccatggagcagaaaaacttcaa 527
Query: 184 aagaaaattctgcggaccaaagcctatctcttactttgctgagttaaagactttagttta 243
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 526 aagaaaattctgcggaccaaagcctacctcttactttgctgagttaaagactttagttta 467
Query: 244 gaaacaaccaactaccatctgtcttcatcattatcacattttgcaaaaggacattttaat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaaacaaccaactaccatctgtcttcatcattatcacattttgcaaaaggacattttaat 407
Query: 304 actaaaaggaatcattattagttgttcttaattcccatgtttccgaaccattggggtgag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 actaaaaggaatcattattagttgttcttaattcccatgtttccgaaccattggggtgag 347
Query: 364 atgctggtgtaaaacaaaattcttcaaagcttggtggcttaaagcaacagtaagtccttt 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 346 atgctggtgtaaaacaaaattcttcaaagcttggtggcttaaagcaacagtaagcccttt 287
Query: 424 tatgtagcttcaactcttagaactaatcgtagctcaggtacccttcatatacccacagag 483
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 286 tatgtagcttcaactcttagaactaatcttagctcaggtacccttcatatacccacagag 227
Query: 484 aagcaggtaaaggagccaagat----ctccatcttggggtggtaccacaaaaaggaatgt 539
|||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 226 aagcaggtaaaggagccaagatggag----a----ggggtggtaccacaaaaaggaatgt 175
Query: 540 aa 541
||
Sbjct: 174 aa 173
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 942
Length adjustment: 10
Effective length of query: 531
Effective length of database: 932
Effective search space: 494892
Effective search space used: 494892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_a24.g1 MSMg01no081_a24.g1 CHROMAT_FILE:
MSMg01no081_a24.g1 PHD_FILE: MSMg01no081_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:09 2005
(297 letters)
>mm_chr18_35399360_35400056
Length = 697
Score = 557 bits (288), Expect = e-163
Identities = 294/296 (99%)
Strand = Plus / Plus
Query: 1 attccctttatcttcttggaatgcttctgtctcaggagtgatcatagtttaaccactttt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 attccctttaccttcttggaatgcttctgtctcaggagtgatcatagtttaactactttt 260
Query: 61 ttaaagactatgtcggcatgatgcacagatagaaaacagagaggaaatatttaagtgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaagactatgtcggcatgatgcacagatagaaaacagagaggaaatatttaagtgcca 320
Query: 121 tttaattatgaacttgcaaaaaataaatctgggtaattcacctcacaaaaacagttgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaattatgaacttgcaaaaaataaatctgggtaattcacctcacaaaaacagttgatt 380
Query: 181 tcattatataaatataaactggtaatggcatagtaaattgcattcatatagaacatgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcattatataaatataaactggtaatggcatagtaaattgcattcatatagaacatgtct 440
Query: 241 gtcaaatgcaattcagtgtttagctcacagaaataaattttaatcctatctcctta 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcaaatgcaattcagtgtttagctcacagaaataaattttaatcctatctcctta 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
