TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATT
CTTTGTTTAGCTTTGTTCCCATTTTTTATAGGATTATTTGGTTCTCTGGA
GTCTAACTTCTTGAGTCTTTGCAAATATTGGATACTATCCCTCTATCAGA
TGTAGGGTTGGTAAAGATCTTTTCCTAATCTGTTGTTTGCTGTTTTGTCC
TATTGACAGTGTCCTTTGCAATTTTATGAGGTCCCATTTGTCAATTCTTG
ATCTTAGAGCATAAGTCATTGGTGTTCTGTTCAGGAAATTTTCCTCTGGC
CCATGTCTTTGGGGCTCTTCCCAACTTTCTCTTCTGTTAGATTCAGTGTA
TCTGGTTTTATGTGGAGGTTCTTGATCTACTTAGACTTGAGCTTTGTACA
GGGAGATAAGAATGGCTCTATTCCCATTCTTCAACATGATAACCACCAGT
TGAACCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTGTATGGTT
TTAGATCCTTTGTCAAAGACCAAGTGATCATAGTTCTGTGGGTTCATTTC
TGTGTCTTCAGTTCTATTTCATTAATCTACCTGCCTGTCACTCTACCAAG
ACCATGTAGTTTTTATCACTATTGCTCTGTAGTACAGCTTGAGTCCAGGG
ATGCTGATTCCCCAAGAAGTTCTTTTATTGTTGAGAATAGTTCACTAT

ATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGGATCAACTCATAACCATGTTGGTCTTCT
TGTCGTATAAATAAATCCCAGTGGTGTTCAGTACATAGGTTGAGAAGGCG
TACATTCATTACCTTGTCAAGCCATATGCCTGCAATTCCTCAGGACCTAA
TACATTTGATGGAATGCATATCTTCATTATTTACTAAGCCTAAATCATTT
TCAGTCAAACATTTCCAGGTCTGACAATTAAGCCAAGGATTTCTGTTTCC
ACCTTAATGGTAAATGGCAGATTTTCTATGAAAGACAATTATTTCAATGA
AGAGATTAAATAAGAAGGTACTTACACATATTTTCGAGCAATTTGGCGAG
CTGAAGAACTATAAATATAAAAGAATACAACAGAAGTATAGAAAAAAACT
CTTTAAGCTCTGAATGGATAAATTGCTGCTTGCAATTGAAAACCCTCAAT
TGTTGGTTCTAATACTCAAAACAGCACTCAAAGGAATAGTGCACTTGACT
GTCGATACCCGCATAAGCACCTAATGATCGCCTTCTGTTCCTTGATGACC
CTGCAATGGCTGACTGCATAAGAAAGGCTGGGATTCTCCTATGTCTTCTC
CCTGTATCCAACATCTGGGCTTTCCTCCCTTTCTTACAGCTCAGTGCTCT
C

Query= MSMg01no083_a06.g1 MSMg01no083_a06.g1 CHROMAT_FILE:
MSMg01no083_a06.g1 PHD_FILE: MSMg01no083_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:37 2005
         (628 letters)



>mm_chr18_52959599_52960629
          Length = 1031

 Score = 1145 bits (592), Expect = 0.0
 Identities = 618/628 (98%), Gaps = 3/628 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   atcaactcataaccatgttggtcttcttgtcgtataaataaatcccagtggtgttcagta 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 atcaactcataaccatgttggtcttcttgtcgtataaataaatcccagtggtgttcagta 772

                                                                       
Query: 64  cataggttgagaaggcgtacattcattaccttgtcaagccatatgcctgcaattcctcag 123
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 771 cataggttgagaaggcgtacattcattaccttgtcaagccttatgcctgcaattcctcag 712

                                                                       
Query: 124 gacctaatacatttgatggaatgcatatcttcattatttactaagcctaaatcattttca 183
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gacccaatacatttgatggaatgcatatcttcattatttactaagcctaaatcattttca 652

                                                                       
Query: 184 gtcaaacatttccaggtctgacaattaagccaaggatttctgtttccaccttaatggtaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gtcaaacatttccaggtctgacaattaagccaaggatttctgtttccaccttaatggtaa 592

                                                                       
Query: 244 atggcagattttctatgaaagacaattatttcaatgaagagattaaataagaaggtactt 303
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 591 atggcagattttctatgaaagacaattatttcaatgaagagattaagtaagaaggtactt 532

                                                                       
Query: 304 acacatattttcgagcaatttggcgagctgaagaactataaatataaaagaatacaacag 363
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 531 acacatattttcgagcaatttggcgagctgaagaactataaatataaaagaagacaacag 472

                                                                       
Query: 364 aagtatagaaaaaaa---ctctttaagctctgaatggataaattgctgcttgcaattgaa 420
           |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aagtatagaaaaaaaaaactctttaagctctgaatggataaattgctgcttgcaattgaa 412

                                                                       
Query: 421 aaccctcaattgttggttctaatactcaaaacagcactcaaaggaatagtgcacttgact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aaccctcaattgttggttctaatactcaaaacagcactcaaaggaatagtgcacttgact 352

                                                                       
Query: 481 gtcgatacccgcataagcacctaatgatcgccttctgttccttgatgaccctgcaatggc 540
           ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 351 gtcgataccagcataagcacctaatgatcgccttctgttccttgatgagcctgcaatggc 292

                                                                       
Query: 541 tgactgcataagaaaggctgggattctcctatgtcttctccctgtatccaacatctgggc 600
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 291 tgactgcataagaaaggctgggattctcctatgtcttctccctgcatccaacatctgggc 232

                                       
Query: 601 tttcctccctttcttacagctcagtgct 628
           ||||||||||||||||||||||||||||
Sbjct: 231 tttcctccctttcttacagctcagtgct 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1031
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1021
Effective search space:   630978
Effective search space used:   630978
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)