AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATTC
ATTAAATTCTTAGGCAAATGGATCGAACTAGAAAATATCATCCTCAGTGA
GGTAACCCAATTACAAAAGAAAACACATGGTATGCCTTCACTGATAAGTG
GATATTAGGCTAGAAGCTCGGAATACCCAAGATATCATTCACAGGCCAAA
TGAAGCTCAAGAAGAAGGAAGACAAAAGTATGGATACTTCGGTCTTTCTT
ATCAGGGAGAGCAAAAAACCCATGGGAGGATATTCAAAGACAATGTATGG
AGCAGAGACTGAAGCAATGACCATCCAGAGACTTCCCCACCTGGGGATTC
GTCCCACATACAGTCACCAAACCCAGACACTACTGTGGATGCCAACAAGT
GCTTGCTGACAGGAACCTGATATAGCTGTCTCTTGAGCGGCTCTGCCAGT
GCCTGACAAATACAGAGGTGGATGCTTTCAGCCAACCATTGGACTGAACA
CAAGGTCCCCAGTGGAGGAGCTATAAAAGGGACCGAAGGAGCTGAAGGAG
CATTCAGCCCCTTAGGAGGAACAACAATATGAACCAAGCAGTACCCCCAG
AACTCCCAGGGACTAAATCACCAACCAAACATTACACATGGAGGGGCCCA
TGGCTCCAGCTGCATATGGAGCAGAGAATAACCTTGTTGGACATCAATAT
GAGG

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATACCGTTCAACAAGATCTTTACTAGATAAG
CCATATTCCACAGCTCCTTGCCTGGGAATCTCAATTTGTAACAACTGACT
CTTGCTTCATTTTCAGATCTTCCCCACATCTCTGCCCACCTATGTGGAAT
ACAGATGTGTTTTCTGGAACTCTAACTCATTTGAAACAGAAAGAGGAAAA
TTACACCCTAAAAGTAGTGAAGCTGAAAACTGAAAAGGATTTTTTGCTGC
TTAATATTTGGAATAAAGTTATTATCTGCTCCTGGACTATTAAGAAACAG
AATTTCACTTTGCTTTAACTAATGCTATTTTAGATCTCTATTACTTTTAG
GCAATTGTAATTCTCACTAACAGATACTGACTTATACATATTAATGTATA
AACATTTGGATTTTTAGATCTTGTCTTTAAAGTTTTTATATTACCTCATG
TGCTAAGTAAAATGATAGTCTTCATTGAATAAACTCATGTATACATTATT
CGTTTACTCAAAATGCATGGTCATCTACAGAATCTAAGCAGAATCTGATA
GCTAGTGACAGGTGTGGAAAGAGTTGTGGCTCTCCAGTTTCTTTATTCTT
ATGCCTCTCCCCTCCTACTATGTAATTTTGCCCAATGAGTACGTGCTCTT
CTTGA

Query= MSMg01no083_o14.g1 MSMg01no083_o14.g1 CHROMAT_FILE:
MSMg01no083_o14.g1 PHD_FILE: MSMg01no083_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:47 2005
         (545 letters)



>mm_chr18_52389869_52390813
          Length = 945

 Score = 1023 bits (529), Expect = 0.0
 Identities = 541/545 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ataccgttcaacaagatctttactagataagccatattccacagctccttgcctgggaat 60
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 745 ataccgttcaacaagatctttactagataagctatattccacagctccttgcctgggaat 686

                                                                       
Query: 61  ctcaatttgtaacaactgactcttgcttcattttcagatcttccccacatctctgcccac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctcaatttgtaacaactgactcttgcttcattttcagatcttccccacatctctgcccac 626

                                                                       
Query: 121 ctatgtggaatacagatgtgttttctggaactctaactcatttgaaacagaaagaggaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctatgtggaatacagatgtgttttctggaactctaactcatttgaaacagaaagaggaaa 566

                                                                       
Query: 181 attacaccctaaaagtagtgaagctgaaaactgaaaaggattttttgctgcttaatattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attacaccctaaaagtagtgaagctgaaaactgaaaaggattttttgctgcttaatattt 506

                                                                       
Query: 241 ggaataaagttattatctgctcctggactattaagaaacagaatttcactttgctttaac 300
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggaataaagttattatctgctccaggactattaagaaacagaatttcactttgctttaac 446

                                                                       
Query: 301 taatgctattttagatctctattacttttaggcaattgtaattctcactaacagatactg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taatgctattttagatctctattacttttaggcaattgtaattctcactaacagatactg 386

                                                                       
Query: 361 acttatacatattaatgtataaacatttggatttttagatcttgtctttaaagtttttat 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 385 acttatacatattaatgtataaacatttggatttttagatcttgtctttaaagtttctat 326

                                                                       
Query: 421 attacctcatgtgctaagtaaaatgatagtcttcattgaataaactcatgtatacattat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attacctcatgtgctaagtaaaatgatagtcttcattgaataaactcatgtatacattat 266

                                                                       
Query: 481 tcgtttactcaaaatgcatggtcatctacagaatctaagcagaatctgatagctagtgac 540
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acgtttactcaaaatgcatggtcatctacagaatctaagcagaatctgatagctagtgac 206

                
Query: 541 aggtg 545
           |||||
Sbjct: 205 aggtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)