Query= MSMg01no084_i22.b1 MSMg01no084_i22.b1 CHROMAT_FILE:
MSMg01no084_i22.b1 PHD_FILE: MSMg01no084_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:37 2005
(582 letters)
>mm_chr18_67986292_67987273
Length = 982
Score = 1044 bits (540), Expect = 0.0
Identities = 570/580 (98%), Gaps = 1/580 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagaaagccatgcctggcttgtaatcccaacactcacttaggaggcaaagacaa 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 ggaattcagaaagccatgcatggcttgtaatcccaacactcacttaggaggcaaagacaa 897
Query: 64 gtctatgacttcaaggccagcttgctctacaattttcaggttagccagagctagctacat 123
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 896 gtctatgacttcaaggccagcttgctctacaattttcagattagccagagctagctacat 837
Query: 124 cccctatattaaaaaaaagaaagaaagaaaagaaaagagaaagaaaag-agaaaaaagag 182
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 836 cccctatattaaaaaaaagaaagaaagaaaagaaaagagaaagaaaagaaaaaaaaagag 777
Query: 183 ttcagagcacacaagtacaattgaacacagagtaagatgagacaagaaaactacaagttc 242
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 776 ttcagagcacacaagtacaattgaacacagagtaagatgagacgagaaaactacaagttc 717
Query: 243 aaggccagcctgggctacaaagtgagacactatctgaaaaacaagacaatacaaaagaaa 302
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 716 aaggccagcctgggctacaaagtgagatactatctgaaaaacaagacaatacaaaaggaa 657
Query: 303 tggttatttttctatttctttcatagtctctaaaaccccaatctacctctttcaagcatt 362
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tggttatttttccatttctttcatagtctctaaaaccccaatctacctctttcaagcatt 597
Query: 363 tcattttttaattcactacatggatcagatggttcaaaagcatggtttcatgtttaggtt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tcattttttaattcactacatggatcagatggttcaaaagcatggtttcatgtttaggtt 537
Query: 423 ctgaggggctagatagagaaatggctccgtagttaaaatgtatactgcctgtaactccag 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ctgaggggctagatagagaaatggctccgtagttaaaatgtatactgcctgtaactccag 477
Query: 483 ccccagggtgtgacactgccttctggcccctacaggcactatatggatgtacacaaatcc 542
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ccccagggtgtgacaccgccttctggcccctacaggcactatatggatgtacacaaatcc 417
Query: 543 atacacacagacacatgcatatacatataattttttcaaa 582
||||||||||||||||||||||||| ||||||||||||||
Sbjct: 416 atacacacagacacatgcatatacacataattttttcaaa 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_i22.g1 MSMg01no084_i22.g1 CHROMAT_FILE:
MSMg01no084_i22.g1 PHD_FILE: MSMg01no084_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:37 2005
(511 letters)
>mm_chr18_67896774_67897685
Length = 912
Score = 957 bits (495), Expect = 0.0
Identities = 507/511 (99%), Gaps = 1/511 (0%)
Strand = Plus / Plus
Query: 2 ggttccagttaatgacatcactcattcccccacacccgaaccaggaaatccttgtcaaca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggttccagttaatgacatcactcattcccccacacccgaaccaggaaatccttgtcaaca 261
Query: 62 catctctgccctccagctccagtagccgatggtcactgttgattctttgccttccaagaa 121
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 catctctgccctcctgctccagtagccgatggtcactgttgattctttgccttccaagaa 321
Query: 122 atctcacttctatgctctgcactgcctttatc-ggggctgctctggtttagggctttgct 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 322 atctcacttctatgctctgcactgcctttatccggggctgctctggtttagggctttgct 381
Query: 181 ctcttcctgtctatccttttctagtcaaccgtactgcattccagttagtacttggagtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctcttcctgtctatccttttctagtcaaccgtactgcattccagttagtacttggagtgc 441
Query: 241 caagagtgcccataggcaataaatacaaaatcaatgagactgaaagagtgactgagtaga 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 caagagtgcccagaggcaataaatacaaaatcaatgagactgaaagagtgactgagtaga 501
Query: 301 tccttttgaacattagagtgctgctgcttctccttctctttcttcttttccttcctttct 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 502 tccttttgaacattagagtgctgctgcttctccttctccttcttcttttccttcctttct 561
Query: 361 tccttcatttagttagttaattagttctcgggggtggggacaggtttttatttttttaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tccttcatttagttagttaattagttctcgggggtggggacaggtttttatttttttaat 621
Query: 421 atagccctggctttcccagaactcattatgtagactacactggcctcaagctcacagtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 atagccctggctttcccagaactcattatgtagactacactggcctcaagctcacagtga 681
Query: 481 tgtatctgcctacctttgcctcctgagtgct 511
|||||||||||||||||||||||||||||||
Sbjct: 682 tgtatctgcctacctttgcctcctgagtgct 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 912
Length adjustment: 10
Effective length of query: 501
Effective length of database: 902
Effective search space: 451902
Effective search space used: 451902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
