Query= MSMg01no088_j23.b1 MSMg01no088_j23.b1 CHROMAT_FILE:
MSMg01no088_j23.b1 PHD_FILE: MSMg01no088_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:09 2005
(372 letters)
>mm_chr18_66601314_66602086
Length = 773
Score = 638 bits (330), Expect = 0.0
Identities = 360/374 (96%), Gaps = 7/374 (1%)
Strand = Plus / Plus
Query: 4 ggaattcaactttacccacccccaccccc-------atctgttcacttaggcagactcct 56
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 198 ggaattcaactttacccacccccaccccccacccccatctgttcacttaggcagactcct 257
Query: 57 gtagtaaagcattcaggtaggccgggtgagttttcaggcagagtcaagagaaagctgcag 116
||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 258 gtagtaaagcattcagggagggagggtgagtttttaggcagagtcaagagaaagctgcag 317
Query: 117 ctgagaaaactatgactgaagtctttccattgactgttcgaggcaggcaattgtgagtgc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctgagaaaactatgactgaagtctttccattgactgttcgaggcaggcaattgtgagtgc 377
Query: 177 gggtgtctagcaagctgacagcaacacccttgagcgttagatactacccagacatcaaac 236
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 378 gggtgtctagcaagctgacagcaacacccttgagcgttagatactacccaggcattaaac 437
Query: 237 gtgagctgtctcccagcccagcagccaggagagaaatgacagccactgagcaaaacaagg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtgagctgtctcccagcccagcagccaggagagaaatgacagccactgagcaaaacaagg 497
Query: 297 gtggggaccctgcagagagaccatctgtaccctcactttcatcaggaactggaatcagat 356
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtggggaccctgcagagagaccaactgtaccctcactttcatcaggaactggaatcagat 557
Query: 357 gggtccgtgactga 370
||||||||||||||
Sbjct: 558 gggtccgtgactga 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 773
Length adjustment: 9
Effective length of query: 363
Effective length of database: 764
Effective search space: 277332
Effective search space used: 277332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_j23.g1 MSMg01no088_j23.g1 CHROMAT_FILE:
MSMg01no088_j23.g1 PHD_FILE: MSMg01no088_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:10 2005
(235 letters)
>mm_chr18_66678800_66679434
Length = 635
Score = 439 bits (227), Expect = e-128
Identities = 233/235 (99%)
Strand = Plus / Minus
Query: 1 atcaaagccctgtgttctgcaggagggcaaatgcttttaactgctaagccaaactctcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atcaaagccctgtgttctgcaggagggcaaatgcttttaactgctaagccaaactctcta 376
Query: 61 gcccaataactacgtggtgaagacatgttctgttgggggtttttggttgtttttgttttc 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 375 gcccaataactacgtggtgaagacatgttctgttaggggtttttggttgtttttgttttc 316
Query: 121 tgaaacccaacatagtgtagttgagcatgttaaccacaaggtggcactagattaccaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgaaacccaacatagtgtagttgagcatgttaaccacaaggtggcactagattaccaaac 256
Query: 181 ttagtgacaccagctttctttcattcaaattaaactgtgaggaggcccagttgtg 235
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 255 ttagtgacaccagctttctttcattcaaattaaactgtgaggaggtccagttgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
