Query= MSMg01no088_k23.b1 MSMg01no088_k23.b1 CHROMAT_FILE:
MSMg01no088_k23.b1 PHD_FILE: MSMg01no088_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:15 2005
(195 letters)
>mm_chr18_73332361_73332956
Length = 596
Score = 331 bits (171), Expect = 2e-95
Identities = 189/195 (96%), Gaps = 1/195 (0%)
Strand = Plus / Plus
Query: 1 agagaaatga-ccctctggcctccatacactcatgagtgcaggcatgcacacacaaacgt 59
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagaaatgacccccctggcctccatacactcatgagtgcaggcatgcacacacaaacgt 260
Query: 60 taggatgctcacacacgcatacacagagtcatggggaagaactcttgaggtacttacagc 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagggtgctcacacacgcatacacagagtcatggggaagaactcttgaggtacttacagc 320
Query: 120 agaaatggagagaagcggtatgtgcattgatactaagaaggaaatgccatcagtgtgtgc 179
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 321 agaaatggagagaagcggtatgtgcactgatactaagaaggaaatgccatccgtgtgtgc 380
Query: 180 ggggagcacggaagg 194
||||||||||||||
Sbjct: 381 agggagcacggaagg 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 596
Length adjustment: 8
Effective length of query: 187
Effective length of database: 588
Effective search space: 109956
Effective search space used: 109956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no088_k23.g1 MSMg01no088_k23.g1 CHROMAT_FILE:
MSMg01no088_k23.g1 PHD_FILE: MSMg01no088_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:15 2005
(235 letters)
>mm_chr18_73480116_73480750
Length = 635
Score = 431 bits (223), Expect = e-125
Identities = 232/235 (98%)
Strand = Plus / Minus
Query: 1 tgactttacctgagaaataagcacccgcccctctggttttcaccccgtctaaggtggtca 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 435 tgactttacctgagaaataagcacccgcccctctggttttcaccctgtctaaggtggtca 376
Query: 61 gtgctcagcacctccttgctctttactccttgctcactacttgggagcatctcgctggcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtgctcagcacctccttgctctttactccttgctcactacttgggagcatctcgctggcg 316
Query: 121 gttgtgtaatatgcactgagcctgagttcctcatgtaggtcacttgcaaggcgttttctg 180
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 315 gttgtgtaatatacactgagcctgagttcctcatgtaggtcacttgcaaggcattttctg 256
Query: 181 ggacaccacagtcctgctgaggtttaggtgctgatgggttctcctggctcattag 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ggacaccacagtcctgctgaggtttaggtgctgatgggttctcctggctcattag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
