Query= MSMg01no088_n09.b1 MSMg01no088_n09.b1 CHROMAT_FILE:
MSMg01no088_n09.b1 PHD_FILE: MSMg01no088_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:27 2005
(282 letters)
>mm_chr18_50290062_50290743
Length = 682
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%)
Strand = Plus / Plus
Query: 1 tgagaagctcctggttagggccttggtaaaaaaaggaaatagttgaagtttggagccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagaagctcctggttagggccttggtaaaaaaaggaaatagttgaagtttggagccagg 260
Query: 61 aagccataactattagttactttttaaaaattttttaaaagaactatttcaatggaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagccataactattagttactttttaaaaattttttaaaagaactatttcaatggaaagt 320
Query: 121 tttttaaaacttcaaacgaatggtggagtcgattatatgttaattccatggtgggggtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttaaaacttcaaacgaatggtggagtcgattatatgttaattccatggtgggggtca 380
Query: 181 agagttattgaaagctgcagcgttgaagaatatggaaggattcagccatctgcatcgtta 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggttattgaaagctgcagcgttgaagaatatggaaggattcagccatctgcatcgtta 440
Query: 241 ggattagtatcatgtgtttgggagtcggtgtgggtacaggaa 282
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agattagtatcatgtgtttgggagtcggtgtgggtacaggaa 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no088_n09.g1 MSMg01no088_n09.g1 CHROMAT_FILE:
MSMg01no088_n09.g1 PHD_FILE: MSMg01no088_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:27 2005
(286 letters)
>mm_chr18_50449732_50450417
Length = 686
Score = 538 bits (278), Expect = e-157
Identities = 284/286 (99%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 1 agtttctctacatccaggaaaagtctgacttcaatttgtccagacttttcttgtaaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agtttctctacatccaggaaaagtctgacttcaatttgtccagacttttcttgtaaattt 312
Query: 61 ggaagggataattttcagggtctttgtctatcaagataaaattaggaagtcctcattcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggaagggataattttcagggtctttgtctatcaagataaaattaggaagtcctcattcaa 252
Query: 121 gctttaaaattaaggcaaaagttccactaggtatttgggggcagtttgtggttttctttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gctttaaaattaaggcaaaagttccactaggtatttgggggcagtttgtggttttctttc 192
Query: 181 tttgtttttttattttgatgttttgttattgttgctgctgttccttttttttttccttac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 191 tttgtttttttattttgatgttttgttattgttgctgctgttcctttttttttt-cttac 133
Query: 241 cctcactatcttccttggtagtaaaattattgagtatatcaatgtg 286
|||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cctcacaatcttccttggtagtaaaattattgagtatatcaatgtg 87
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
