Query= MSMg01no089_n10.b1 MSMg01no089_n10.b1 CHROMAT_FILE:
MSMg01no089_n10.b1 PHD_FILE: MSMg01no089_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:47 2005
(274 letters)
>mm_chr18_12630090_12630762
Length = 673
Score = 484 bits (250), Expect = e-141
Identities = 268/274 (97%), Gaps = 1/274 (0%)
Strand = Plus / Minus
Query: 1 ggagcctagagattgtcatacaacaataccagtacagagtgctgggcaagcacactccag 60
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 473 ggagcctagagattgtcatacaacagtaccagtacagactgctgggcaagcacactccag 414
Query: 61 gtacctgttcaactcagctacttaagacagaaagaaagtctttaatgtaaggcaggcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gtacctgttcaactcagctacttaagacagaaagaaagtctttaatgtaaggcaggcaaa 354
Query: 121 atagaaaactattcacactttcttcccaaaaatattagttaataaaatgatatcaatgta 180
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 353 atagaaaactattcacactttcttcccaaaaatattaattaataaaatgatatcaatgt- 295
Query: 181 aaaaaaaatgattcctccctctgttcaaatgctgatgtgagaggagagaaacaaatgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aaaaaaaatgattcctccctctgttcaaatgctgatgtgagaggagagaaacaaatgtgt 235
Query: 241 ggcttttctttgtttcacagctaaaatggcagcg 274
||| ||||||||||||||| ||||||||||||||
Sbjct: 234 ggcctttctttgtttcacaactaaaatggcagcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 673
Length adjustment: 9
Effective length of query: 265
Effective length of database: 664
Effective search space: 175960
Effective search space used: 175960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no089_n10.g1 MSMg01no089_n10.g1 CHROMAT_FILE:
MSMg01no089_n10.g1 PHD_FILE: MSMg01no089_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:47 2005
(291 letters)
>mm_chr18_12462914_12463604
Length = 691
Score = 553 bits (286), Expect = e-162
Identities = 289/290 (99%)
Strand = Plus / Plus
Query: 1 taccgcttgaaacaaattctcaagtcattgtctagttccttccctccacttttcttgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taccgcttgaaacaaattctcaagtcattgtctagttccttccctccacttttcttgcct 260
Query: 61 acactctggaccaaatccacttcttttcatttttaaaaattaaattacattcttattaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acactctggaccaaatccacttcttttcatttttaaaaattaaattacattcttattaac 320
Query: 121 tctctaagaattaattactaattactcaacacaatatattgaccatctgacacacacccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctaagaattaattactaattactcaacacaatatattgaccatctgacacacacccc 380
Query: 181 atctcccctcagatccatctggacctccagacccactagctaacaataatgtccttctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctcccctcagatccatctggacctccagacccactagctaacaataatgtccttctgt 440
Query: 241 gatggtcccccaatcctgcctcttctccagtaggagccagtgtctttctg 290
| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctggtcccccaatcctgcctcttctccagtaggagccagtgtctttctg 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
