Query= MSMg01no092_h24.b1 MSMg01no092_h24.b1 CHROMAT_FILE:
MSMg01no092_h24.b1 PHD_FILE: MSMg01no092_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:22 2005
(142 letters)
>mm_chr18_67725309_67725849
Length = 541
Score = 224 bits (116), Expect = 1e-63
Identities = 131/136 (96%), Gaps = 1/136 (0%)
Strand = Plus / Minus
Query: 7 gaattctttgaatagcgaatttgaattttgccaatactggtagctctctgcgttataggg 66
||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 341 gaattctttgaatagtgaatttgaattttgccaatactggtagctctctgcattatagag 282
Query: 67 ctcatagctgtctcctactcttcccctctcagtgtttcttttttatgcatttttttttcc 126
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 281 ctcatagctgtctcctactcttcccctctcagtgtttcttttttatgca-ttttttttcc 223
Query: 127 tgaaacagggtttctc 142
||| ||||||||||||
Sbjct: 222 tgagacagggtttctc 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 142
Length of database: 541
Length adjustment: 8
Effective length of query: 134
Effective length of database: 533
Effective search space: 71422
Effective search space used: 71422
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no092_h24.g1 MSMg01no092_h24.g1 CHROMAT_FILE:
MSMg01no092_h24.g1 PHD_FILE: MSMg01no092_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:22 2005
(594 letters)
>mm_chr18_67647651_67648644
Length = 994
Score = 1122 bits (580), Expect = 0.0
Identities = 590/594 (99%), Gaps = 2/594 (0%)
Strand = Plus / Plus
Query: 1 aacacagaagttatgatgaaagccagtttatttcccccttcataaattctaaaataaaat 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 203 aacacagaagttatgatgaaagccagtttatttcccccttcaaaaattctaaaataaaat 262
Query: 61 accttaaaaaaaaaaagagagagagagagagacaaggtctcactgtgtagaccaggctgg 120
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 accttaaaaaaaaa--gagagagagagagagacaaggtctcactgtgtagaccaggctgg 320
Query: 121 ccctgaaatcccaaagattttctgcttctacttctggaatgctggaaataaaggcatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctgaaatcccaaagattttctgcttctacttctggaatgctggaaataaaggcatgtg 380
Query: 181 gcatcactcctggctgaaatactactcactggagcacactcagcactgtcgttttccctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcatcactcctggctgaaatactactcactggagcacactcagcactgtcgttttccctg 440
Query: 241 gaatgtcagccattctctgcttacatttgggtagccaggtcagagcccagtcagtgggac 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 gaatgtcagccattctctgcttacatttgggaagccaggtcagagcccagtcagtgggac 500
Query: 301 acatttcttcatggtccttcaatgtgcaaaatttctgttttatttgaacaaatagcaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acatttcttcatggtccttcaatgtgcaaaatttctgttttatttgaacaaatagcaaca 560
Query: 361 taatttaaaaacttccatgtctcctacattcatacctcaagtttagtcctccattagtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taatttaaaaacttccatgtctcctacattcatacctcaagtttagtcctccattagtac 620
Query: 421 agttagaaaaataaaaaccttacagatttcatggcgtgagttcacggtattaaccacata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agttagaaaaataaaaaccttacagatttcatggcgtgagttcacggtattaaccacata 680
Query: 481 tctcttcaaaacatcatttttagaatgactgtataataacttttgggtttaattttaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctcttcaaaacatcatttttagaatgactgtataataacttttgggtttaattttaaag 740
Query: 541 ggctgagacttgaaatcaagtaattaaggtcattaagtcaatgtgcaaaatcaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggctgagacttgaaatcaagtaattaaggtcattaagtcaatgtgcaaaatcaa 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
