NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCNNNNCCCCC
CCNNCCCCCCCTTTGTCTCNCCCCTCXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCGCGGAATTCTCTATGAACTCAGTCAGCGAAGT
GCTTTACTGTAAGCTAGCCAGTGTTATTCTATTTCAGGTTTCACTATGAT
CTTTGTTATAGTACTCTTAAGTTGACAAAAAATAGAGTTATTTTCCTACA
TGCTCTTGACTTTTTCTCAACTAAATTCTCTTTTCATTATTAAGGCATAT
TCAATTCCTGTACAGATTCAAAGTACACAGTCGTTCTGCATTTTGTTTTG
GCCTTTCTTGTTAGGCAGACATGCTGTGTTATACTTTTACAGTTATCATA
GCTTATAAATGGTATATAGAAGACTAAAAGAGTATTGTCCAAAGTCCAGT
ATCTTGCATTAACCTTTCAATCCTGAAGTGATACTTGTGGATCTATTAAT
AGTCAGTTTGCAAAACTTGGATGAAAAAAAATACATACCCTATGTGTGTG
GCTGAGTTTGTGCTTTTGTCTTTATGACCCGTGCATAGGTTTCTTGCCTA
GAGTCCTGGCAGCTCACTAACCTCTCAAGACTGATTGCCCAGAGGAGTGG
ACCTTGACATGAATCTTCATTTTGTCTTCCTGCCTGTCTTGGAGCTCTAT
TCATTGAATGAGAAAGCTCACCTGCAATTGAGTTCACAAAGGCCAGTCTT
TA

NNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCTCT
CCCCCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATTCATCAGAAGATGGAAACAGA
GGCAAACACCCACAGCCAAACATCACGGGGACCTGTAGGGTCATGTCAAA
AGTGAGCCAGAGGATCAAGGACACCACAAGAAGACCTAGATAGTCAAATA
ACCTGGACCCATAGGCTCAAAGAGACTCAGCCACTAAGTTAAAAGCCTAC
CGGGGTTGAACCTAGACCACTTACACATTTGAAGCAGATATAGACCTTAG
TCTTCATATGGATCTCTTAACGGTTGGAATAGTGTCTTGGGGTGGCTGTC
TCTGATTCTGTTGCCTGCCACTGGATCCTCTTCCCCTAGCTAGGCTGACA
CATTTGGCCTCAGTGGGAGAGGATGTGCTTAGTCTTGCTGGGACTTGATG
TCCTAGGGCTGGTCAATACCCAAAGGCATTGGTGCTCCTTCTCTAAGGAA
AAGGGGAGGGGTGATGTGGGGTGGAAGTTGTCATGCTTAACATCTCTCTC
CTGCTCAATCCACATATCTATTCTATCATTATCCCCCCATTCATCTTCTC
CCTCCTCACACACTCCTTTCATTCCTCTACTTCTCTCCCCCTTTACTCCC
TCCCTATTTCCTTTTCAATTCTTTCCTCCTCTATTTTTTTTTTTTTCCCC
CTCC

Query= MSMg01no092_p02.b1 MSMg01no092_p02.b1 CHROMAT_FILE:
MSMg01no092_p02.b1 PHD_FILE: MSMg01no092_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:58 2005
         (484 letters)



>mm_chr18_51359434_51360314
          Length = 881

 Score =  841 bits (435), Expect = 0.0
 Identities = 469/481 (97%), Gaps = 3/481 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctctatgaactcagtcagcgaagtgctttactgtaagctagccagtgttattct 63
           ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctatgaattcagtcagcaaagtgctttactgtaagctagccagtgttattct 263

                                                                       
Query: 64  atttcaggtttcactatgatctttgttatagtactcttaagttgacaaaaaatagagtta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atttcaggtttcactatgatctttgttatagtactcttaagttgacaaaaaatagagtta 323

                                                                       
Query: 124 ttttcctacatgctcttgactttttctcaactaaattctcttttcattattaaggcatat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttttcctacatgctcttgactttttctcaactaaattctcttttcattattaaggcatat 383

                                                                       
Query: 184 tcaattcctgtacagattcaaagtacacagtcgttctgcattttgttttggcctttcttg 243
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 384 tcaattcctgtacagattcaaagtacacagttgttctgcattttgttttggcctttcttg 443

                                                                       
Query: 244 ttaggcagacatgctgtgttatacttttacagttatcatagcttataaatggtatataga 303
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttaggcagacatgctgtgctatacttttacagttatcatagcttataaatggtatataga 503

                                                                       
Query: 304 agactaaaagagtattgtccaaagtccagtatcttgcattaacctttcaatcctgaagtg 363
           |||||||||   |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 504 agactaaaac--tattgtccaaagtccagtatcttgcattaatctttcaatcctgaagtg 561

                                                                       
Query: 364 atacttgtggatctattaatagtcagtttgcaaaacttggatgaaaaaaaatacataccc 423
           |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 562 atacttgtagatctattaatagtcagtttgcaaaacttggatgaaaaaaa-tacatactc 620

                                                                       
Query: 424 tatgtgtgtggctgagtttgtgcttttgtctttatgacccgtgcataggtttcttgccta 483
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 tatgtgtgtggctgagtttgtgcttttgtctttatgacctgtgcataggtttcttgccta 680

            
Query: 484 g 484
           |
Sbjct: 681 g 681


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 881
Length adjustment: 10
Effective length of query: 474
Effective length of database: 871
Effective search space:   412854
Effective search space used:   412854
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)