Query= MSMg01no093_p10.b1 MSMg01no093_p10.b1 CHROMAT_FILE:
MSMg01no093_p10.b1 PHD_FILE: MSMg01no093_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:21 2005
(194 letters)
>mm_chr18_47595322_47595915
Length = 594
Score = 325 bits (168), Expect = 1e-93
Identities = 190/202 (94%), Gaps = 8/202 (3%)
Strand = Plus / Minus
Query: 1 gaaaaattgtgacaaccagaggtggtgaatgacttcgaggaaacaatagtgttttcccat 60
|||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 357 gaaaaattgtgagaaccagaggtggtgaatgactttgaggaaacagtagtgttttcccat 298
Query: 61 cacaacaagccagatgtgcatacaaactcacatgcacattcctggtggtttagctgatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 cacaacaagccagatgtgcatacaaactcacatgcacattcctggtggtttagctgatgg 238
Query: 121 gttactgtgacctttctcaatgagatctgagctatg--------atatgtccatttgcta 172
|||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 237 gttactgtgacctttctcaatgagatctgagctatgactgttatatatgtccatttgcta 178
Query: 173 ttaagcataaacgaaggaattt 194
||||||||||| ||||||||||
Sbjct: 177 ttaagcataaaggaaggaattt 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no093_p10.g1 MSMg01no093_p10.g1 CHROMAT_FILE:
MSMg01no093_p10.g1 PHD_FILE: MSMg01no093_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:21 2005
(279 letters)
>mm_chr18_47490018_47490696
Length = 679
Score = 507 bits (262), Expect = e-148
Identities = 274/278 (98%)
Strand = Plus / Plus
Query: 1 ttaggaagccctcgttattgaaaatctttccaaagtatgtcagaacacttttctctggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaggaagccctcgttattgaaaatctttccaaagtatgtcagaacacttttctctggag 260
Query: 61 tgaggtagagccgcggcagagaaatgtacagagctgttttgaaaggcagaaaaacaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaggtagagccgcggcagagaaatgtacagagctgttttgaaaggcagaaaaacaaatt 320
Query: 121 tagaaaagctgctaactgctcatcagaccttcctcttgctagaaagcagctccctgaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tagaaaagctgctaactgctcatcagaccttcctcttgctagaaagcagttccctgaggc 380
Query: 181 agtttaggattctgagttattttgttttgcttcgttttgtttttatctcaaagcctcttg 240
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 agtttaggattctgagttgttttgttttgctttgttttgtttttatctcaaagcctcttg 440
Query: 241 cccctgctagcagtacttcctagcttattccgggacca 278
|||||| |||||||||||||||||||||||||||||||
Sbjct: 441 cccctggtagcagtacttcctagcttattccgggacca 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
