Query= MSMg01no095_p02.b1 MSMg01no095_p02.b1 CHROMAT_FILE:
MSMg01no095_p02.b1 PHD_FILE: MSMg01no095_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:07 2005
(629 letters)
>mm_chr18_57499627_57500655
Length = 1029
Score = 1131 bits (585), Expect = 0.0
Identities = 616/627 (98%), Gaps = 4/627 (0%)
Strand = Plus / Plus
Query: 6 gaattctcttatgcc-caatggaattaagctagacatgaataacagaaagatacatggaa 64
||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 204 gaattctcttatgccacaatggaattaagctagacatgaatagcagaaagttacatggaa 263
Query: 65 attttaacaaaatcgcaagaaattgggatataaaacttgttacaacatgtgggcactggc 124
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attttaacaaaat-gtaagaaattgggatataaaacttgttacaacatgtgggcactggc 322
Query: 125 acaggctctgctctaggagaaacttaaagctttgcacatggatatcagaggagagctcca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 acaggctctgctctaggagaaacttaaagctttgcacatggatatcagaggagagctcca 382
Query: 185 aaaatcaataacctaagcttctgttttaagaaagtggaaaaagaataccagattaacttt 244
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 383 aaaatcaataacctaagcttctgttttaagaaagtggaaaaagaatagcagattaacttt 442
Query: 245 aagtgggaagataaatactaaaagccagaaatcaacaaaatttaaaatctcactaaagga 304
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 443 aagtgggaagataaatactaaaagccagaaatcaacaaaatttaaaatctcagtaaagga 502
Query: 305 aatctgtaaatccaagcctcggtcctttaaaaataacaataaggtgataaatatctgctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aatctgtaaatccaagcctcggtcctttaaaaataacaataaggtgataaatatctgctt 562
Query: 365 aagaacagaagaagataccagcaggtaatatcacaaatgagagagacaaactaccactgt 424
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 563 aagaacagaagaagataccagcaggtaatatcacaaatgagagagacagactaccactgt 622
Query: 425 tattttgtagatgttaacaggtgactaaagggaatttaggagcaactttgtgcccacaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tattttgtagatgttaacaggtgactaaagggaatttaggagcaactttgtgcccacaag 682
Query: 485 tctcatatcttagatgataaaggacgacaca--ttgaaagatatggagccttcgagagcc 542
||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 683 tctcatatcttaggtgataaaggacgacacacattgaaagatatggagccttcgagagcc 742
Query: 543 agagggatctgagaacgtcacccttcagcccaacataaacccccctatgtattcttttta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 agagggatctgagaacgtcacccttcagcccaacataaacccccctatgtattcttttta 802
Query: 603 acccttattttctgttaacagtctcca 629
|||||||||||||||||||||||||||
Sbjct: 803 acccttattttctgttaacagtctcca 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_p02.g1 MSMg01no095_p02.g1 CHROMAT_FILE:
MSMg01no095_p02.g1 PHD_FILE: MSMg01no095_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:07 2005
(287 letters)
>mm_chr18_57645451_57646137
Length = 687
Score = 509 bits (263), Expect = e-148
Identities = 281/287 (97%)
Strand = Plus / Minus
Query: 1 tctgagcctccagttacagatccatcagaagagcaacgtgacctccccgaaggctcagcc 60
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 487 tctgagcctccagttacagatccatcagaagagcaatgtgacctccaggaaggctcagcc 428
Query: 61 ttggaactctttgaggagggtaatctcaagatgaatgttttcccgtttaaaacagatttt 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 427 ttggaactctttgaggagggtaatctcaagatgaatgttttcccatttaaaacagatttt 368
Query: 121 cactaaaaatagcagcaaccgcctctacttatcccagagctagagtctgtaaagggcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cactaaaaatagcagcaaccgcctctacttatcccagagctagagtctgtaaagggcatg 308
Query: 181 ggttacactgctaaggaaaagtcaccatacggcccgcagggttgccgtgcaaggtgggga 240
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 307 ggttacactgctaaggaacagtcaccatacggcccgcagggttgccgtgaaaggtgggga 248
Query: 241 ccacagaggcagcatttgtggcttgtgcaggctgtctcctattaaca 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ccacagaggcagcatttgtggcttgtgcaggctgtctcctattaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
