Query= MSMg01no096_g02.b1 MSMg01no096_g02.b1 CHROMAT_FILE:
MSMg01no096_g02.b1 PHD_FILE: MSMg01no096_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:42 2005
(570 letters)
>mm_chr18_71867772_71868741
Length = 970
Score = 184 bits (95), Expect = 2e-50
Identities = 101/103 (98%)
Strand = Plus / Minus
Query: 1 cacacactgtctcaaatttcatggcatcagattgactatactgtccctgctaagagcctg 60
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 303 cacacactgtctcaaatttcatggcatcagactgactttactgtccctgctaagagcctg 244
Query: 61 actacttgtttttgagcctgaacacaatcaacttgtaaataat 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 actacttgtttttgagcctgaacacaatcaacttgtaaataat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_g02.g1 MSMg01no096_g02.g1 CHROMAT_FILE:
MSMg01no096_g02.g1 PHD_FILE: MSMg01no096_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:42 2005
(327 letters)
>mm_chr18_71755551_71756278
Length = 728
Score = 543 bits (281), Expect = e-159
Identities = 323/349 (92%), Gaps = 22/349 (6%)
Strand = Plus / Plus
Query: 1 ctaaaatcaa-ga-atttatgttgtacttcaagcattcagattaattgctgctgtgtcat 58
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ctaaaatcaaagatatttatgttgtacttcaagcattcagattaattgctgctgtgtcat 239
Query: 59 tttcatgtcattaactgtatatgataattatatctaccaatcaactcattgtttcactag 118
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 240 tttcatgtcattaactgtatatgataattatatctaccaatgaactaattgtttcactag 299
Query: 119 ctattgagt-------------------aaaatatataaaatataaatacatgcggttat 159
||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 300 ctattgagtcacataatacataaaaagtaaaatatataaaatataaatacatgcggttat 359
Query: 160 ttttagtgatgtaagagggagattccattgctgtaagaaaaacttttggatgattttttt 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttttagtgatgtaagagggagattccattgctgtaagaaaaacttttggatgattttttt 419
Query: 220 ttt-ctgctgttagtttgacaacagaccctagcatgttttgtttaattgaggaaataaat 278
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 420 ttttctgctgttagtttgacaacagaccctagcatgttttgtttaactgaggaaataaat 479
Query: 279 aaaactgaagtgttcaacgctcataaagaagtttcctaaatttgtacac 327
||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aaaaccgaagtgttcaacgctcataaagaagtttcctaaatttgtacac 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 728
Length adjustment: 9
Effective length of query: 318
Effective length of database: 719
Effective search space: 228642
Effective search space used: 228642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
