TTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCCGNCGCCCCACACCCNNNC
CCACTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAATCCGCG
GAATTCAAGGGATTTTCCCAAGACATAAACAAGCACTTCATTGAACTCCA
AAATTATAACAATGAATGCTTATGTGCATGTCCAAAAAATTACAAGTACA
GATCTGAATGAAATGGCAAAAAGTAATTCAGTATTTGAAAACTGAACTCA
ATACAAAGATGATAACACTGAAGAAAACAGAATGAAAATGGAAATGAAAA
TCTCAAGATTCCAATTAGAAACTTCAGGGAATTCTTACAAGTAGAATTAA
GCAGAAGGCAGATATTGAGAAATATCATGTCTCAAAGATAAAACAGGAGG
TCTATATGAAACAAAGGATATAAAGACCTTGTTAAAGCATGGGAAAGGAA
CATGCAGGAAATGTGGAACACCACTAAAGACTAAATTATTATATTATAGT
CATTGAAGAGGGAGAAGTATCCCAGGTCAATGATATATAACAGATATTTA
ACAGTATCATAGAAAAATCAATAACTTCCACAAAGAAAGGACGCATCCAT
ACAGGTACTAGTACCTAGAACACCAACCATATACCGAATAGACACACACC
CCCATAGCATATCACAGTTAAAATGATAACTATAGAGAACTAATACCAAC
TATTGAAAAGCTTCCAGAGGAAAAACTCAAGTCATATAATAAGTATAACC
CCCCACAATTACCCCCTTGATTTCTCATAGCAAC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXAAGACCAAAAAGGTAAAATTAACATGCAGGCACTTACTTCAAGCC
TGTCGTTCTTCATGGGCTTTCAGTACCTTCGAGACATCACCATCCATCTA
AGACATGCCATTTAGAATCTTGGGAACCCTTGTTCCGTTAGCCCTCTCAT
CCTTGTTTTTACCAGTTCCAAATATTGGTAAGAGAAGTCCCAGTTGGATC
CATGATCTGTTACATTTGTTGTTGTTCCATTATGCAACCTGCTGCCTCGA
TGTCATCCATTCCACATCAAGTGCTCATTCCCTCTCGCTCTATTGTCAGT
GATCTGCCAGGCTTAACCAAGGTATTACTAGAGCAGCCTTCCCAAGAGCT
GAACATTAGAGTCTGCTCTAGCAGCTCAAGCTTCAGCTTCCTCAGCTTTC
TTTTTCTTTTCATGAACACTTTTTATTGTTTGATCTTTGAATTCCTGGTT
TTGTCCCTTACATTGACACGTCCAAATGTGTTCTGTCTTCCCTTCCTTAG
GGTCCCCTCCCTGCCTCTTTGATGCCCCCTTTTATATCTCTATAGATGCC
CTTCCTTTGGCCTTTTCTCTAGCTTCATTGCCTACCATGCCTGTGTGCCC
CTTCTCCTCCTCCTTTTTCATCCCATTTATACAAGCACTTTCAGACTGTG
TTCCT

Query= MSMg01no096_n03.g1 MSMg01no096_n03.g1 CHROMAT_FILE:
MSMg01no096_n03.g1 PHD_FILE: MSMg01no096_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:19 2005
         (460 letters)



>mm_chr18_49459107_49459966
          Length = 860

 Score =  851 bits (440), Expect = 0.0
 Identities = 457/466 (98%), Gaps = 6/466 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagaccaaaaaggtaaaattaacatgcaggcacttacttcaagcctgtcgttcttcatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagaccaaaaaggtaaaattaacatgcaggcacttacttcaagcctgtcgttcttcatgg 506

                                                                       
Query: 61  gctttcagtaccttcgagacatcaccatccatctaagacatgccatttagaatcttggga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gctttcagtaccttcgagacatcaccatccatctaagacatgccatttagaatcttggga 446

                                                                       
Query: 121 acccttgttccgttagccctctcatccttgtttttaccagttccaaatattggtaagaga 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 445 acccttgttccgttagccctctcatccttgtttttaccaattccaaatattggtaagaga 386

                                                                       
Query: 181 agtcccagttggatccatgatctgttacatttgttgttgttccattatgcaacctgctgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtcccagttggatccatgatctgttacatttgttgttgttccattatgcaacctgctgc 326

                                                                       
Query: 241 ctcgatgtcatccattccacatcaagtgctcattccctctcgctctattgtcagtgatct 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcaatgtcatccattccacatcaagtgctcattccctctcgctctattgtcagtgatct 266

                                                                       
Query: 301 gccaggcttaaccaaggtattactagagcagccttcccaagagctgaacattagagtctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gccaggcttaaccaaggtattactagagcagccttcccaagagctgaacattagagtctg 206

                                                                       
Query: 361 ctctagc------agctcaagcttcagcttcctcagctttctttttcttttcatgaacac 414
           ||||| |      |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctctacccaccagagctcaagcttcagcttcctcagctttctttttcttttcatgaacac 146

                                                         
Query: 415 tttttattgtttgatctttgaattcctggttttgtcccttacattg 460
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tttttattgtttgatctttgaattcctggttttgtcccttacattg 100


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space:   382500
Effective search space used:   382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)