Query= MSMg01no097_b06.b1 MSMg01no097_b06.b1 CHROMAT_FILE:
MSMg01no097_b06.b1 PHD_FILE: MSMg01no097_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:41 2005
(502 letters)
>mm_chr18_71867912_71868813
Length = 902
Score = 903 bits (467), Expect = 0.0
Identities = 494/503 (98%), Gaps = 1/503 (0%)
Strand = Plus / Plus
Query: 1 agggataaatgatatggggagaaaagtgggctttaagcttatattttaaaatatataaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 agggataaatgatatggggagaaaagtgggctttaagcttatattttaaaatatataaaa 259
Query: 61 tgttatagaacatttatttgcacatggtttgggaatgatctagttgagaaagttagctga 120
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tattatagagcatttatttgcacatggtttgggaatgatctagttgagaaagttagctga 319
Query: 121 cccgaggagaaaggaaagagaagcaatgaggg-atgatgtcccagggagcttggcactgc 179
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 320 cccaaggagaaaggaaagagaagcaatgaggggatgatgtcccagggagcttggcactgc 379
Query: 180 acagccatcacttacgagggacacaagtgtatgcataaaagcagcacctgttgaatacat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 380 acagccatcacttacgagggacacaagtgtatgcataaaagcagcacctgttggatacat 439
Query: 240 ttggcatcccaggtgtgtcctcctttgatgtcatctgtttcttcagtgtaaagagaagca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttggcatcccaggtgtgtcctcctttgatgtcatctgtttcttcagtgtaaagagaagca 499
Query: 300 ttgtcatcctcatcagagactgaggaagatgtggaggagaaagaagagagagaccacacc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 500 ttgtcatcctcatcagagactgaggaagatgtggaggagaaagaagagagagaccccacc 559
Query: 360 atgcaacagtgtgattcaacgatcctgatgcactgatcagagtatggaaacagacataat 419
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 560 atgcaacagtgtgattcatcgatcctaatgcactgatcagagtatggaaacagacataat 619
Query: 420 agtaaagagaagacagacatcaaggtaatgagattctcatcacctacactctaccctcag 479
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 620 agtaaagagaagacagacatcaaggtaatgagattctcattacctacactctaccctcag 679
Query: 480 agcttgtaagcctgctggatgaa 502
|||||||||||||||||||||||
Sbjct: 680 agcttgtaagcctgctggatgaa 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no097_b06.g1 MSMg01no097_b06.g1 CHROMAT_FILE:
MSMg01no097_b06.g1 PHD_FILE: MSMg01no097_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:53:41 2005
(453 letters)
>mm_chr18_71997235_71998085
Length = 851
Score = 826 bits (427), Expect = 0.0
Identities = 446/453 (98%), Gaps = 2/453 (0%)
Strand = Plus / Minus
Query: 1 ttgtttggtgtgcatttgatccataaaataaggaacatgaatcttgggaccataaacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttgtttggtgtgcatttgatccataaaataaggaacatgaatcttgggaccataaacatc 503
Query: 61 tcagatttctgagttatttcatattttgatatatttacatatgttcaatgagaactctta 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tcagatttctgagttatttcagattttgatatatttacatatgttcaatgagaactctta 443
Query: 121 acattgtggcaaatatgaacacaaaatccagtcatgtatcatataaaacatgcttcatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acattgtggcaaatatgaacacaaaatccagtcatgtatcatataaaacatgcttcatgc 383
Query: 181 acatacttatgaggtatggtcatataaatgcttttaataattttattcaccaggccaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acatacttatgaggtatggtcatataaatgcttttaataattttattcaccaggccaggt 323
Query: 241 gccatttatttgcatattgatatatgtcagtgtttgaaagttttatatatatatatacac 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 322 gccatttatttgcatattgatatatgtcagtgtttgaaagttttatatacatata--cac 265
Query: 301 acacatacattttttagttgggcaatgtcaaccctatatttttctatctgtctgtctgac 360
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 264 acacatacattttttagttggggaatgtcaaccctatatttttctgtctgtctgtctgac 205
Query: 361 tgcttattcaaggaaaggatttaccataagacattatcatatacatctctggaggttaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tgcttattcaaggaaaggatttaccataagacattatcatatacatctctggaggttaag 145
Query: 421 aactcccaagatctgcagctaacacattcaaga 453
|||||||||||||||||| ||||||||||||||
Sbjct: 144 aactcccaagatctgcagttaacacattcaaga 112
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 851
Length adjustment: 10
Effective length of query: 443
Effective length of database: 841
Effective search space: 372563
Effective search space used: 372563
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
