Query= MSMg01no098_i10.b1 MSMg01no098_i10.b1 CHROMAT_FILE:
MSMg01no098_i10.b1 PHD_FILE: MSMg01no098_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:40 2005
(615 letters)
>mm_chr18_29046653_29047668
Length = 1016
Score = 1075 bits (556), Expect = 0.0
Identities = 592/604 (98%), Gaps = 1/604 (0%)
Strand = Plus / Minus
Query: 13 gaattctttattacgtgtcattttacactgaacacatttcatacactttgggtaactgca 72
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 gaattctttacaatgtgtcattttacactgaacacatttcatacactttgggtaactgca 757
Query: 73 atgtgaacatttctgagtcatgtgattccaacccctttgtctatcactgactatacatga 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 atgtgaacatttctgagtcatgtgattccaacccctttgtctatcactgactatacatga 697
Query: 133 aatgggtaccatatattcccttgtttttcctgctcaagtttgtaaatctcttcccttagg 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 aatgggtaccatatattcccttgtttttcctgctcaagtttgtaaatctcttcccttagg 637
Query: 193 acatgggtgtgtatcaaagaaaagtgatatgcaaaattgccattttttttt-ctggcaaa 251
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 636 acatgggtgtgtatcaaagaaaagtgatatgcaaaactgccatttttttttactggcaaa 577
Query: 252 gaaagaactaaaattagctaccatctcaggtttcctaacttatccacctccagagttctt 311
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 576 gaaagaactaaaattagctaccatctcatgtttcctaacttatccacctccagagttctt 517
Query: 312 tgtggaattgtaaattgaatcacttttggctaaatagcagtaattgtttcttctccatga 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tgtggaattgtaaattgaatcacttttggctaaatagcagtaattgtttcttctccatga 457
Query: 372 aacagatacactcttcactgataacaaggggatcgggatatccaaagtgagaggacaaac 431
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 456 aacagatacactcttcactgataacaaggggatcggggtatccaaagtgagaggacaaac 397
Query: 432 aagcatatgaacctgacaaagaaagaaaaggccagaagagagacaaacattcttatgagg 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aagcatatgaacctgacaaagaaagaaaaggccagaagagagacaaacattcttatgagg 337
Query: 492 gacatatctcagtaatgtggaataaaataatagaacataaacgacttcaggcttctttta 551
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 336 gacacatctcagtaatgtggaataaaataatagaacataaacgacttcgggcttctttta 277
Query: 552 ttgtcagtctatgttttcatatgaatagttggattattttaggatcaataattgatgtct 611
||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 276 ttgtcagtctatgttttcacatgaatacttggattatattaggatcaataattgatgtct 217
Query: 612 ttaa 615
||||
Sbjct: 216 ttaa 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1016
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1006
Effective search space: 608630
Effective search space used: 608630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_i10.g1 MSMg01no098_i10.g1 CHROMAT_FILE:
MSMg01no098_i10.g1 PHD_FILE: MSMg01no098_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:40 2005
(239 letters)
>mm_chr18_28901500_28902138
Length = 639
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%)
Strand = Plus / Plus
Query: 1 tttgaatggacaagggtagtggaactatttagactttatatgatctaatttttagaggct 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tttgaatggacaagggtagtggaactatttagactttaaatgatctaatttttagaggct 260
Query: 61 attgtcagacaagtaaatagcactttctactcttgcatcataaacaaattcatttaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgtcagacaagtaaatagcactttctactcttgcatcataaacaaattcatttaatat 320
Query: 121 ttttgacagagatgatataagtggctattacaaggaatgggttaacaattgattaataaa 180
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtgacagagatgatgtaagtggctattacaaggaatgggttaacaattgattaataaa 380
Query: 181 atctgacatgttattgttacataggtgttctgattatggagggatagatgaatggataa 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctgacatgttattgttacataggtgttctgattatggagggatagatgaatggataa 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
