Query= MSMg01no103_a06.b1 MSMg01no103_a06.b1 CHROMAT_FILE:
MSMg01no103_a06.b1 PHD_FILE: MSMg01no103_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:47 2005
(454 letters)
>mm_chr18_41928273_41929125
Length = 853
Score = 812 bits (420), Expect = 0.0
Identities = 441/448 (98%), Gaps = 1/448 (0%)
Strand = Plus / Plus
Query: 7 gaattctgaaggtttcgcacatcatagctgtcttctctctcaacctgtttgtatgtgaca 66
||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 207 gaattctgaaggttt-gtacatcatagctgtcttctctctcagcctgtttgtatgtgaca 265
Query: 67 aaaaagaatcaaggagaatatgtcccaagcattgtacaggtccatggcagataaaccatt 126
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 266 aaaaagaatcaagaagaatatgtcccaagcattgtacagatccatggcagataaaccatt 325
Query: 127 ccccagtattttacagccgcagcacacatcaataataaagcagggtgtgactcctatcaa 186
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 326 ccccagtattttacagccgcagcacacatcaataatcaagcagggtgtgactcctatcaa 385
Query: 187 aactctcacaggtactcattctatctcagagcaaagctttgatgtgttgcctattctcca 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aactctcacaggtactcattctatctcagagcaaagctttgatgtgttgcctattctcca 445
Query: 247 tcctggacctaagaaagagagcagcagctaagctgtatagcaaggaacacaaggacaaac 306
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 446 tcctggacctaagaaagagagcagcagctaagctgcatagcaaggaacacaaggacaaac 505
Query: 307 ctagcttgggtacaacacatgaacctggtctgagacttctacaattgatgaactactctc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ctagcttgggtacaacacatgaacctggtctgagacttctacaattgatgaactactctc 565
Query: 367 cagaaacaaatataattaattaattgattgattaattaactaatgtaattctaaaacaat 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cagaaacaaatataattaattaattgattgattaattaactaatgtaattctaaaacaat 625
Query: 427 ttgagcccttcatttgcatctttcaata 454
||||||||||||||||||||||||||||
Sbjct: 626 ttgagcccttcatttgcatctttcaata 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 853
Length adjustment: 10
Effective length of query: 444
Effective length of database: 843
Effective search space: 374292
Effective search space used: 374292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no103_a06.g1 MSMg01no103_a06.g1 CHROMAT_FILE:
MSMg01no103_a06.g1 PHD_FILE: MSMg01no103_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:47 2005
(330 letters)
>mm_chr18_42063854_42064583
Length = 730
Score = 520 bits (269), Expect = e-152
Identities = 281/285 (98%)
Strand = Plus / Minus
Query: 1 tgggcaggtgctctgtgtagtgactgaatgtgaagttttatagaaagattcgttggtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tgggcaggtgctctgtgtagtgactgaatgtgaagttttatagaaagattcgttggtcac 402
Query: 61 tggtctgatactctagatgacacgttacaaccaagaccccagccttttctctataaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tggtctgatactctagatgacacgttacaaccaagaccccagccttttctctataaaatg 342
Query: 121 ggtgatcttagttttattccacagagatttgaaaggcgttcataagcctgtgagcatgcg 180
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 341 ggtgatcttagttttattccacagagatttgaaaggagttcataagcttgtgagcatgca 282
Query: 181 tggcacatgttaaacttcaataattactagtattaaaagatgtattttgataaaaagtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tggcacatgttaaacttcaataattactagtattaaaagatgtattttgataaaaagtgt 222
Query: 241 atttataggtaaatagctctttgtgtgtgtgtgtgtgagagagag 285
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 221 atttataggtaaatagctctttgtgtgtgtgtgtgagagagagag 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
