Query= MSMg01no103_b07.b1 MSMg01no103_b07.b1 CHROMAT_FILE:
MSMg01no103_b07.b1 PHD_FILE: MSMg01no103_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:52 2005
(320 letters)
>mm_chr18_37174267_37174987
Length = 721
Score = 567 bits (293), Expect = e-166
Identities = 311/317 (98%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 5 gaattctttgcatt-caacttacattttaaaatttctttccgcaaaaatatacagaactt 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgcattgcaacttacattttaaaatttctttccgcaaaaatatacagaactt 264
Query: 64 gtttttgaccagagagcaaaacttcctatcctccaacctgatgttaaaggctttaaattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtttttgaccagagagcaaaacttcctatcctccaacctgatgttaaaggctttaaattt 324
Query: 124 tcctagattttacctactctttcataaaccttcgttttaagaccaggaatatattacatg 183
| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 325 ttctagattttacccactctttcataaaccttcgttttaggaccaggaatatattacatg 384
Query: 184 ttcaatcattaatatttgattattgtgtgatattgaaatgtattgtctgggccgtctgca 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcaatcattaatatttgattattgtgtgatattgaaatgtattgtctgggccgtctgcg 444
Query: 244 ccatttagcaaactggagtttgggcaatattttcttcaggagtatcttaaaggacagata 303
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 ccatttagcaaactggagtttgggcaacattttcttcaggagtatcttaaaggacagata 504
Query: 304 acatttcaaaggataaa 320
|||||||||||||||||
Sbjct: 505 acatttcaaaggataaa 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no103_b07.g1 MSMg01no103_b07.g1 CHROMAT_FILE:
MSMg01no103_b07.g1 PHD_FILE: MSMg01no103_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:53 2005
(199 letters)
>mm_chr18_37352104_37352702
Length = 599
Score = 369 bits (191), Expect = e-107
Identities = 197/199 (98%)
Strand = Plus / Minus
Query: 1 tggcttttgaactgctggttttggtcgtttgggggagcccaccctcattcccatccttag 60
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tggcctttgaactgctagttttggtcgtttgggggagcccaccctcattcccatccttag 340
Query: 61 ttttaatgagacaactatgtttcctagttataaattattttagcttcacctaaatggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttttaatgagacaactatgtttcctagttataaattattttagcttcacctaaatggaat 280
Query: 121 tggattctttgtcatctaggaatgtcagtagaaacgatcttgtcttgccctttgagcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tggattctttgtcatctaggaatgtcagtagaaacgatcttgtcttgccctttgagcctg 220
Query: 181 ctgttctagaactgtacac 199
|||||||||||||||||||
Sbjct: 219 ctgttctagaactgtacac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
