TCAATAAXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAGACCGCGGAA
TTCCAGTGCCAATTTCATATCTACGATTAACATATCTACAACTAACATAT
CTACATATCCAACTCTTGCTGCTAAGGCTGAGGAATAATCTTAGAACAGT
CATAGGGGAAACTACAAAGGCTTTCTTGAGATAGCATTTACAAGTATTGC
CAGAAGGCTCACCCATAAATTATCACAAACATGACTGCCTAAACATGAAC
TGAATAAGCACAGCAATAATATACATGGCATTGTGGTCAATAAATATCTC
ACTGAGGCTTTATCTTTACCGAAATATTTCTAACTTTATATACTACCAGA
TTCTCCTCACGACCAGAGAGGAATGTCTTCAACGCCAGACATAACCTTCA
CTAGGGATGGGTACTTCACTTCCACGTCTCGTGCGTTAGGTTCAACTACC
TTCCTACAAATAGCATCATAATACTGAGGAGATTATAACCAGATCCTCAG
GAATATATCGATACACCCTATACCAACCCCTTAGCACAAACCTATCATTT
ACTAAAAACCGCCAGGTCGCCATTAATCTTACTGCCATACCATTACTTAT
TCCCCATTTGCGCATATTCCCAATCCGGTCCTTCTACCATCATATTTACC
TATGACTCCTTATCATTGCACATAACCAACTTAATATAAAGCAATATTTA
ACTCTTTCTTATTTACTTAATT

TCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTATAAAACTTTAAAAGATATTCAGAGGGGA
CTGATAGAAAGAATAAAAAGACGACAGACAGGACAAAGTAGAATGAGAAA
GGATGGATCGTAGCTGAAAGGGTTTGTATGAATTCTTTAAATAGAAAAGA
CAGAGTAAACTGCAAGTGTGTGGACACCTGATTCCAGGAAAGAAAACATG
AGATATGTCATTTAGAGCAGTGGCTCTCAACCTTCCCAATGCTGTGACCC
TTAAATATAGATTCTCCTGTTGTGCTGACCCCCTAACCATAAAGTTACTT
TGTTGCTGCATCATAACTGAAATTTTGCAACTGTTATGAATTATCGTATA
AATATCTGATATGCAGGATATCTTCTTTGGCCCCTTTGAAAGGGTCATTG
GACTCCAAGGGAGTTTTGGCAGGACTCCGAGGGAGTTGTGACACCTTGCT
GATGTAGAGGTATGTGCTTACAGTTCAAGCAAGAAGTTGGCAACTTAATG
CTCCTAAAAATAGCCATATCTTGAGATGAACATTCCTAACTGAATTCTAT
AAGTCTTGGATATTTCTTGAGCAAAAATTAGGGTCTGAATTTACATTGCA
AATAGAGTATAGATGATAGGTTGCAAACAGATAATGAAAAAATATTGTTT
TA

Query= MSMg01no104_i13.g1 MSMg01no104_i13.g1 CHROMAT_FILE:
MSMg01no104_i13.g1 PHD_FILE: MSMg01no104_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:50 2005
         (578 letters)



>mm_chr18_16085816_16086793
          Length = 978

 Score = 1073 bits (555), Expect = 0.0
 Identities = 573/579 (98%), Gaps = 1/579 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tataaaactttaaaagatattcagaggggactgatagaaagaataaaaa-gacgacagac 59
           |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 200 tataaaactttaaaagatattcagaggggactgacagaaagaataaaaaagacgacagac 259

                                                                       
Query: 60  aggacaaagtagaatgagaaaggatggatcgtagctgaaagggtttgtatgaattcttta 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aggacaaagtagaatgagaaaggatggatcgtagctgaaagggtttgtatgaattcttta 319

                                                                       
Query: 120 aatagaaaagacagagtaaactgcaagtgtgtggacacctgattccaggaaagaaaacat 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aatagaaaagacagagtaaactgcaagtgtgtggacacctgattccaggaaagaaaacat 379

                                                                       
Query: 180 gagatatgtcatttagagcagtggctctcaaccttcccaatgctgtgacccttaaatata 239
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagatatgtcatttagagcagtgactctcaaccttcccaatgctgtgacccttaaatata 439

                                                                       
Query: 240 gattctcctgttgtgctgaccccctaaccataaagttactttgttgctgcatcataactg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gattctcctgttgtgctgaccccctaaccataaagttactttgttgctgcatcataactg 499

                                                                       
Query: 300 aaattttgcaactgttatgaattatcgtataaatatctgatatgcaggatatcttctttg 359
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 500 aaattttgcaactgttatgaattatcatataaatatctgatatgcaggatatcttctttg 559

                                                                       
Query: 360 gcccctttgaaagggtcattggactccaagggagttttggcaggactccgagggagttgt 419
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gctcctttgaaagggtcattggactccaagggagttttggcaggactccgagggagttgt 619

                                                                       
Query: 420 gacaccttgctgatgtagaggtatgtgcttacagttcaagcaagaagttggcaacttaat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gacaccttgctgatgtagaggtatgtgcttacagttcaagcaagaagttggcaacttaat 679

                                                                       
Query: 480 gctcctaaaaatagccatatcttgagatgaacattcctaactgaattctataagtcttgg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gctcctaaaaatagccatatcttgagatgaacattcctaactgaattctataagtcttgg 739

                                                  
Query: 540 atatttcttgagcaaaaattagggtctgaatttacattg 578
           |||||||||||||||||||||||||| ||||||||||||
Sbjct: 740 atatttcttgagcaaaaattagggtccgaatttacattg 778


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space:   549824
Effective search space used:   549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)