Query= MSMg01no105_n01.b1 MSMg01no105_n01.b1 CHROMAT_FILE:
MSMg01no105_n01.b1 PHD_FILE: MSMg01no105_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:34 2005
(176 letters)
>mm_chr18_49255543_49256118
Length = 576
Score = 327 bits (169), Expect = 3e-94
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 5 gaattccaactactgccaccttggatagagacctctcaattatatctcagcttattaatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaactactgccaccttggatagagacctctcaattatatctcagcttattaatt 264
Query: 65 tttaaaacatacatacaaacaaaattatgttgatttgattccacaggaaaaccaggtcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttaaaacatacatacaaacaaaattatgttgatttgattccacaggaaaaccaggtcag 324
Query: 125 ccttcagagatagtgctttctagttttagaaccaaggtggatttttata 173
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccttcagagatagtgctttctagttttagaaccaaggtggatttttata 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 576
Length adjustment: 8
Effective length of query: 168
Effective length of database: 568
Effective search space: 95424
Effective search space used: 95424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no105_n01.g1 MSMg01no105_n01.g1 CHROMAT_FILE:
MSMg01no105_n01.g1 PHD_FILE: MSMg01no105_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:34 2005
(500 letters)
>mm_chr18_49309055_49309954
Length = 900
Score = 673 bits (348), Expect = 0.0
Identities = 399/418 (95%), Gaps = 8/418 (1%)
Strand = Plus / Minus
Query: 87 attttctttgagtttgtttatgtagtgggttacattgatggattttcgtatattgaacca 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 attttctttgagtttgtttatgtagtgggttacattgatggattttcgtatattgaacca 841
Query: 147 tccctgcatccctggaatgaagcttacttgatcaaggtgaatgattgttttgatgtgttc 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tccctgcatccctggaatgaagcttacttgatcaaggtgaatgattgttttgatgtgttc 781
Query: 207 ttggatttggtttgtgagaattttattgaatatttttgcatcgatattcatacggaaaat 266
|||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||
Sbjct: 780 ttggatttggtttgtgagaattttcttgaatatttttgcatcgatattcataagggaaat 721
Query: 267 tggcctgcttttccctttctgtcatcacattgccatccagactgaggaagacccagaact 326
|||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||
Sbjct: 720 tggcctgcttttccctttctgtcaccaccttgtcatccagactgaggaagacccagaact 661
Query: 327 ccatgg---tcaggtgagtcatggccatgctgcatcagtaagcactgcaagca-cacagg 382
| ||| | |||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 660 c--tgggact-aggtgagtcatggccatgctgcatcagtaagcactgcaagcacca-agg 605
Query: 383 tggccgcgggaatgctggaggtatgcatcactacaggaccaacttttacaaatatcatcc 442
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 604 aggccgcgggaatgctggagacatgcatcaccacaggaccaacttttacaaatatcatcc 545
Query: 443 agattactttgggaaagttggtatgaggcattaccatttggagaggaaccagagcttc 500
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 544 agattactttgggaaagttggtatgaggcattaccatttgaagaggaaccagagcttc 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
