TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTATAAGATCATCAATTCATCTAAACAGCATTATTTCATGAAAGTTCA
TCTTCATGTTGATCTGTAGGAAATTTGCCCAATAGGGTGAGCTAATACCC
AGGTATCAATCATAACAGACTACAAGCAAAGTGGTCTTTCTTTGCCCAAT
CATACCCTGTCAGAACAATGAGGAATACAACAATGACAAACATGAGAAGG
CACATCACCAGCAAGAAGCATTCCTTGGACAAAGCCCCTGGGGCCATGTG
TCTGCCAGTAAACCTGATCAAATACCCATGACTGGGGAGGTTATAGGCAT
TAGGAAGTGTGTGTTACTGGCAGTGTTTAGCTAAATAGTCACGCTTTCAA
ACTGCCTTCTAAATATTTATATTTATAAACTTAAATTTATGCTGCTTTCA
ACCTTGGTCAGAGAAGCAATTTTTCACAGTTGGTAGTGGTTAATGCAGAG
ATTGATAACTGGCCAATGTGCTGAAAATAAATGAGCCTGCATCTTCAGCT
ATAAAAGAACCATCGATATCAACCTTCCACCACCCAAGGACATTGTATAA
GAGGGGCCCCTGAAATACTGAACGAGCTGAATGATGGGGAGAACAACACG
GCTAGTGAGCAACCCAAAACTTTAGAGTGGATTTGGAAAAGGTTCTTGAG
GGCCCAGCCCTAGGGTGAGAGCTC

CTCTTTNNNCNTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGATTGCCCCTTTC
CTCTGGAGAGGAGGCCGACTCCCAATGAGAAAGAACATTGCAATACCTGG
GCTATTACACACAGTAGAGATTTCCCACAAGGGACTGATGGCCATTTACT
CAAATAATTACACACTAAAGAAAAGAAATACACAAATTTTCTCATAGCTG
TGTATCAGAAAACTCATTTTAATATGTTAAGAACGCATAATATAAAAGTT
GCCACATTTAATAGAATAAAAATCAGAAATAAAGCAAGTTCACATGATAG
TGGTACATCTGGGTCTATAGACTAAGCCTGTCCTTATCTTCCCAGTTCTA
GACTACACAATAGGGACAGCCATACAGAGAAAGTGAAATACATATTAGTT
TTTGTTGTTATTGTTGTTGTTTTTTAGCCTATATGGTAAGACCAACAGCA
GTGAAATAATCACTAATGGTAGCCTTAGAATTTTATTAGTTCATGCTTAG
GTAGACATCAACATTAAAATCCCAGGTGACATGGCACAAACTTATGCTGC
CTGTAAAGTAATAAATATATGTTGCAGAGGTAATGGTCTCCATCATATCT
CTGGTTTAACTGCTCGATACATGAAAAGATTAATGGAATCATGGTGAATG
TTTGTTGGTGAGTGAGAACAAGCCAGGGCAATGAA

Query= MSMg01no110_o17.g1 MSMg01no110_o17.g1 CHROMAT_FILE:
MSMg01no110_o17.g1 PHD_FILE: MSMg01no110_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:39 2005
         (610 letters)



>mm_chr18_58788957_58789966
          Length = 1010

 Score = 1164 bits (602), Expect = 0.0
 Identities = 608/610 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgattgcccctttcctctggagaggaggccgactcccaatgagaaagaacattgcaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 atgattgcccctttcctctggagaggaggccgactcccaatgagaaagaacattgcaata 897

                                                                       
Query: 61  cctgggctattacacacagtagagatttcccacaagggactgatggccatttactcaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 cctgggctattacacacagtagagatttcccacaagggactgatggccatttactcaaat 837

                                                                       
Query: 121 aattacacactaaagaaaagaaatacacaaattttctcatagctgtgtatcagaaaactc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 aattacacactaaagaaaagaaatacacaaattttctcatagctgtgtatcagaaaactc 777

                                                                       
Query: 181 attttaatatgttaagaacgcataatataaaagttgccacatttaatagaataaaaatca 240
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 776 attttaatatgttaagaacgcataatataaaagttgtcacatttaatagaataaaaatca 717

                                                                       
Query: 241 gaaataaagcaagttcacatgatagtggtacatctgggtctatagactaagcctgtcctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gaaataaagcaagttcacatgatagtggtacatctgggtctatagactaagcctgtcctt 657

                                                                       
Query: 301 atcttcccagttctagactacacaatagggacagccatacagagaaagtgaaatacatat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 atcttcccagttctagactacacaatagggacagccatacagagaaagtgaaatacatat 597

                                                                       
Query: 361 tagtttttgttgttattgttgttgttttttagcctatatggtaagaccaacagcagtgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tagtttttgttgttattgttgttgttttttagcctatatggtaagaccaacagcagtgaa 537

                                                                       
Query: 421 ataatcactaatggtagccttagaattttattagttcatgcttaggtagacatcaacatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ataatcactaatggtagccttagaattttattagttcatgcttaggtagacatcaacatt 477

                                                                       
Query: 481 aaaatcccaggtgacatggcacaaacttatgctgcctgtaaagtaataaatatatgttgc 540
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 476 aaaatcccaggtgacatggcacaaacttatgctgcctgtaaagtcataaatatatgttgc 417

                                                                       
Query: 541 agaggtaatggtctccatcatatctctggtttaactgctcgatacatgaaaagattaatg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agaggtaatggtctccatcatatctctggtttaactgctcgatacatgaaaagattaatg 357

                     
Query: 601 gaatcatggt 610
           ||||||||||
Sbjct: 356 gaatcatggt 347


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space:   600000
Effective search space used:   600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)