Query= MSMg01no112_d04.b1 MSMg01no112_d04.b1 CHROMAT_FILE:
MSMg01no112_d04.b1 PHD_FILE: MSMg01no112_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:17 2005
(252 letters)
>mm_chr18_22566639_22567290
Length = 652
Score = 456 bits (236), Expect = e-133
Identities = 248/252 (98%)
Strand = Plus / Plus
Query: 1 gttctagggagttgaatctattttgtctttatagctatggctgggcccacttacacatga 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 gttctagggagttgaatctattttgtctttatagctatggctgggtccacttacacatga 260
Query: 61 gcaaacctctttcatcagagaaaataatgaaatgaggccagtgatgtgggatcttcatga 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaaacctctttcatcagggaaaataatgaaatgaggccagtgatgtgggatcttcatga 320
Query: 121 ggagagaccttacataaggcaatagtactgttcccacatgagtcacctgttacagctaca 180
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 ggagagaccttacataaggccatagtactgttcccacatgagtcaactgttacagctaca 380
Query: 181 ttgtcctctgaccaaatttatattaggactcttatttcctgacaaacccaatggaattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtcctctgaccaaatttatattaggactcttatttcctgacaaacccaatggaattat 440
Query: 241 gtttatatgttg 252
||||||||||||
Sbjct: 441 gtttatatgttg 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 652
Length adjustment: 9
Effective length of query: 243
Effective length of database: 643
Effective search space: 156249
Effective search space used: 156249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no112_d04.g1 MSMg01no112_d04.g1 CHROMAT_FILE:
MSMg01no112_d04.g1 PHD_FILE: MSMg01no112_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:17 2005
(201 letters)
>mm_chr18_22705122_22705721
Length = 600
Score = 337 bits (174), Expect = 4e-97
Identities = 189/194 (97%), Gaps = 1/194 (0%)
Strand = Plus / Minus
Query: 8 agagaatctttatttagaaagaaaacattaatattcttctgtggcgtctaactaaaaaga 67
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 400 agagaatctttatttagaaagaaaacattaatattcttctgtggggtctaactaaaaaga 341
Query: 68 gctctaatttatattgctgcctgctagtacaatagtgaacgtaaaaatggagcaagcaga 127
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 340 gctctaattcatattgctgcctgctagtacaatagtgaacgt-aaaatggagcaagcaga 282
Query: 128 tgctgtctcaccttctctggtgtatcatgcatggcatgcaactgtagtcctgaagcaagc 187
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgctggctcaccttctctggtgtatcatgcatggcatgcaactgtagtcctgaagcaagc 222
Query: 188 ttgtccatctgtgc 201
||| ||||||||||
Sbjct: 221 ttgcccatctgtgc 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 600
Length adjustment: 8
Effective length of query: 193
Effective length of database: 592
Effective search space: 114256
Effective search space used: 114256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
