Query= MSMg01no112_f22.b1 MSMg01no112_f22.b1 CHROMAT_FILE:
MSMg01no112_f22.b1 PHD_FILE: MSMg01no112_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:30 2005
(437 letters)
>mm_chr18_65735326_65736162
Length = 837
Score = 830 bits (429), Expect = 0.0
Identities = 435/437 (99%)
Strand = Plus / Minus
Query: 1 tgctgagtccctcgatgcaaattgccttggttggtctctgtttaatgacagtccttaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tgctgagtccctcgatgcaaattgccttggttggtctctgtttaatgacagtccttaggt 578
Query: 61 atttcctggcccaagggcataacacattcccaggagaaaccaaggctgtctaacagagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 577 atttcctggcccaagggcataacacattcccaggagaaaccaaggctgtttaacagagtg 518
Query: 121 ctagaaaggctcggctctctgtctccaggtgacgcctttgcaagagacatccactcccag 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 517 ctagaaaggctcggctctctgtctccaggtgacccctttgcaagagacatccactcccag 458
Query: 181 agcgctgtccattgaggcccttcaccacggatagcactgggggtgaagttctttccaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 agcgctgtccattgaggcccttcaccacggatagcactgggggtgaagttctttccaata 398
Query: 241 ctgtcccacaaatgtgatgcagaggttgtctggtactttatttccaggtcacacagctcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctgtcccacaaatgtgatgcagaggttgtctggtactttatttccaggtcacacagctcg 338
Query: 301 aggccctcaccagcacgaaccctcagaagcagctctcactaaaagtatccagtgtttgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aggccctcaccagcacgaaccctcagaagcagctctcactaaaagtatccagtgtttgct 278
Query: 361 attatcagctccatcaatgctatgagaaccccgcccccaatgcagctgatcacaattcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 attatcagctccatcaatgctatgagaaccccgcccccaatgcagctgatcacaattcta 218
Query: 421 ccttccgggcccacggc 437
|||||||||||||||||
Sbjct: 217 ccttccgggcccacggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no112_f22.g1 MSMg01no112_f22.g1 CHROMAT_FILE:
MSMg01no112_f22.g1 PHD_FILE: MSMg01no112_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:30 2005
(462 letters)
>mm_chr18_65574892_65575753
Length = 862
Score = 843 bits (436), Expect = 0.0
Identities = 461/480 (96%), Gaps = 18/480 (3%)
Strand = Plus / Plus
Query: 1 attacataatttgtaaaatgatgactagaaaagggaaggcagggttagattgatactgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 attacataatttgtaaaatgatgactagaaaagggaaggcagggttagattgatactgta 242
Query: 61 taaactaagagatatcacttctagcaataaaaactcgttggaaattctccgcatagagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 taaactaagagatatcacttctagcaataaaaactcgttggaaattctccgcatagagaa 302
Query: 121 aaacatgtttttctaaatgtaaagtcgttgtcgtagcattaacgaatgtgcaaagatggg 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaacatgtttctctaaatgtaaagtcgttgtcgtagcattaacgaatgtgcaaagatggg 362
Query: 181 tctggagagatggctgaacattttagagtacttgctgctctttcagaggacctaagttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tctggagagatggctgaacattttagagtacttgctgctctttcagaggacctaagttca 422
Query: 241 gttcccagcacccacactgagtagcccacaagcacccataactccagctccagaggatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gttcccagcacccacactgagtagcccacaagcacccataactccagctccagaggatct 482
Query: 301 accacccttttctggcctctgcagacacacacacac-cacaca----------------- 342
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 483 accacccttttctggcctctgcagacacacacacacacacacacacacacacacaccaca 542
Query: 343 actaagaatgtgcaaagatgccggcattggtttgatgacaggaaatgaaagttcagtcca 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 actaagaatgtgcaaagatgccggcattggtttgatgacaggaaatgaaagttcagtcca 602
Query: 403 gaaggacacgctttcctgagaggaaggcgatagtcgttgctacacaagggtgatggtgtg 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gaaggacacgctttcctgagaggaaggcgatagtcgttgctacacaagggtgatggtgtg 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
