Query= MSMg01no113_m22.b1 MSMg01no113_m22.b1 CHROMAT_FILE:
MSMg01no113_m22.b1 PHD_FILE: MSMg01no113_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:21 2005
(429 letters)
>mm_chr18_78380515_78381344
Length = 830
Score = 770 bits (398), Expect = 0.0
Identities = 422/430 (98%), Gaps = 1/430 (0%)
Strand = Plus / Plus
Query: 1 tggataaatcttgacatgtacattgggtaaaggacaggattgtattacccttacaccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggataaatcttgacatgtacattgggtaaaggacaggattgtattacccttacaccctt 260
Query: 61 cctcagtcttctataagaccccaggtgcctggaagctctgctagcggaggaagaccttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcagtcttctataagaccccaggtgcctggaagctctgctagcggaggaagaccttag 320
Query: 121 gttagtattcaaacagtctggacttaccactgccattgtattggagagggcagctcccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttagtattcaaacagtctggacttaccactgccattgtattggagagggcagctcccat 380
Query: 181 gtatgcacagaacaggcctgtggaggaacaagaccagtagagtcagcatcccagagcttt 240
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtatgcacagaacagggctgtggaggaacaagaccagtagagtcagcatcccagagcttg 440
Query: 241 tcttcttcagcttctgtcctagcaagacaggggttccgacccagagctggcttttcgaca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttcttcagcttctgtcctagcaagacaggggttccgacccagagctggcttttcgaca 500
Query: 301 gccttagcattggacgccagccttaacctgacgcggtcccttccttt-caggtatcctcc 359
||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 501 gccttagcattggacgccagccttaacctgatgtggtcccttccttttcaggtatcctcc 560
Query: 360 caccaccatgcactcactgagggcagaggataaaggttacatatccttttatctgcttgc 419
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 caccaccatgcattcactgagggcagaggataaaggttacacatccttttatctgcttgc 620
Query: 420 atactcatca 429
||||||||||
Sbjct: 621 atactcatca 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 830
Length adjustment: 9
Effective length of query: 420
Effective length of database: 821
Effective search space: 344820
Effective search space used: 344820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_m22.g1 MSMg01no113_m22.g1 CHROMAT_FILE:
MSMg01no113_m22.g1 PHD_FILE: MSMg01no113_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:21 2005
(412 letters)
>mm_chr18_78543653_78544464
Length = 812
Score = 750 bits (388), Expect = 0.0
Identities = 406/412 (98%)
Strand = Plus / Minus
Query: 1 ttagaatttggtccaccacatagctcatgcctgtaattccaacatctgaaggtggctact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ttagaatttggtccaccacatagctcatgcctgtaattccaacatctgaaggtggctact 732
Query: 61 aataggagggcctgtgtgagcttaagacctacacatgtgcaagcttgtgtaatgagttcc 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 731 aataggagggcctgtgtgagcttaagacctacacatgtgcaagcttatgtaatgagttcc 672
Query: 121 tagacaacctacgattcagagcaataccccgtctctaatcaatcaatcaatcaatcaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tagacaacctacgattcagagcaataccccgtctctaatcaatcaatcaatcaatcaatt 612
Query: 181 agaatttgatgaaggagtaggattcagcttttagaggaaaagataatgggatagagttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 agaatttgatgaaggagtaggattcagcttttagaggaaaagataatgggatagagttta 552
Query: 241 tttattctcaaagttggatattaaattcagattaataaactattaaattaaagccagtga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tttattctcaaagttggatattaaattcagattaataaactattaaattaaagccagtgg 492
Query: 301 attcttttccctcttcttgatgttcacattctctaatctcacaaatagtttatctgcctc 360
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 491 attcttttccctcttcttgatgttcacattctctaatcttagaaatagtttatctgcctc 432
Query: 361 tacaattccacgtccagaaaccatcttccattaacttgttttgcattttatt 412
|||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tacaatcccacgcccagaaaccatcttccattaacttgttttgcattttatt 380
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
