AACCCCNAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCTTTGTTCACCTCTGAGCCCCATCTTTTAAGGGGGT
TATTTGATTTTCTGGAGTCCACCTCCTTGAGTTCTTTATATATATTGGAT
TTTAGTCCCCTATTTGATTTAAGATAGGTAAAGATCCAATCCCAATCTGT
TGGTGGTCTTTTTGTCTTATTGACGGTGTCTTCCTTGCAGAAGCTTTGCA
GTTTCATGAGGTCCCATTTGTCAATCCTCCATCTTACAGCACAAGCCATT
GCTGCTCTATTCAGGAATTTTCCCCCTGTACCCATATCTTCTAGACTTTT
CCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTT
CCTTGTTCCACTTAGATTTGATCTTAGTACAAGGAGATAGAAATGGATCA
ATTCGCATTCATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAAT
GCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGT
GACCATAGGTGTGTGGGTTCGTTTCTGGGTCTTCAATTCTATTCCATTGG
TCTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTTATAACAATTGC
TCTGTACTAAAGCTTTAGGCTCAGGATGGTGATTTCCACCAGAAGTTACT
TTTATCCTTG

NCCCCNCCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTAATCAAACTAGATCAT
TGAGACATAGGCATTTTGGTAAATTTGGACTTTATTCTCCTACCGTGATT
TCTAAGTTACTAAATCAGAAATAAGTCTTGTGCCTTATGTTAATTAAGTT
ATTCTTAGTTAGGTTGTAGAGCCACAAGGTCATGAGATTGCCAAGTTGAA
GGACTACATTTACACATTAGTTCTGAAAACAGCACAAAAATGATATACAC
AGCCCCTGGCATAAAGAGACAAATCGGTGTGTTCAAAGTTCCAAAGTAGC
TGAGATGAAAGGATGGACCATCTAGAGACTGCCATGCCCAGGAATCCATC
CCATAATCAGCCTCCAAACGCTGACACCATTGCATACACCAGCAAGATTT
TGCTGAAAGAACCCTGATATAGCTGTCTCTTGTGAGACTATGCCAGGGCC
TGGCAAACACAGAAGTGGATGTTCACAGTCAGCTATTGGATGGATCACAG
GGCCCCCAATGGAGGAGCTGGAGAAAGTACCCAAGGAGCTAAAGGGATCT
GCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCCTGGAGT
TCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCATTGGGAAG
AGAGA

Query= MSMg01no116_m08.g1 MSMg01no116_m08.g1 CHROMAT_FILE:
MSMg01no116_m08.g1 PHD_FILE: MSMg01no116_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:07 2005
         (543 letters)



>mm_chr18_71332108_71333046
          Length = 939

 Score =  953 bits (493), Expect = 0.0
 Identities = 529/543 (97%), Gaps = 4/543 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaatcaaactagatcattgagacataggcattttggtaaatttggactttattctcct 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaatcaaactagaccattgagacataggcattttggtaaatttggactttattctcct 260

                                                                       
Query: 61  accgtgatttctaagttactaaatcagaaataagtcttgtgccttatgttaattaagtta 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 acagtgatttctaagttactaaatcagaaataagtcttgtgccttatgttaattaagcta 320

                                                                       
Query: 121 ttcttagttaggttgtagagccacaaggtcatgagattgccaagttgaaggactacattt 180
           | |||||    |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttag----gttgtagagccacaaggtcatgagattgccaagttgaaggactacattt 376

                                                                       
Query: 181 acacattagttctgaaaacagcacaaaaatgatatacacagcccctggcataaagagaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 acacattagttctgaaaacagcacaaaaatgatatacacagcccctggcataaagagaca 436

                                                                       
Query: 241 aatcggtgtgttcaaagttccaaagtagctgagatgaaaggatggaccatctagagactg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aatcggtgtgttcaaagttccaaagtagctgagatgaaaggatggaccatctagagactg 496

                                                                       
Query: 301 ccatgcccaggaatccatcccataatcagcctccaaacgctgacaccattgcatacacca 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ccatgcacaggaatccatcccataatcagcctccaaacgctgacaccattgcatacacca 556

                                                                       
Query: 361 gcaagattttgctgaaagaaccctgatatagctgtctcttgtgagactatgccagggcct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 557 gcaagattttgctgaaagaaccctgatatagctgtctcttgtgagactatgtcggggcct 616

                                                                       
Query: 421 ggcaaacacagaagtggatgttcacagtcagctattggatggatcacagggcccccaatg 480
           |||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggcaaatacagaagtggatactcacagtcagctattggatggatcacagggcccccaatg 676

                                                                       
Query: 481 gaggagctggagaaagtacccaaggagctaaagggatctgcaaccctataggtggaacaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gaggagctggagaaagtacccaaggagctaaagggatctgcaaccctataggtggaacaa 736

              
Query: 541 caa 543
           |||
Sbjct: 737 caa 739


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 939
Length adjustment: 10
Effective length of query: 533
Effective length of database: 929
Effective search space:   495157
Effective search space used:   495157
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)