NTAAATAAAAATNTTTATNTTTTTATATTATTTAATAAAATAAATCAGAC
TATACACTATAACTCTATATATTACAACCTAACATTACATACACCATTAA
CTAATATATCCACGCTAATCCGATCTCATATCTTACGATCTTATCCGCCA
TAATTTGACTAATGTGCGTGTCAACAACTAACACTCATTTAAACCAATTA
TCACTCGCTTCCTACTCGCGGTATATATTACAGCTCTCTACCACGTTTTC
TTCCGTTATCCCGTATCGATATGTCCACATTATTATACGTCACGCCATAC
TATCATTCGGTATACACTCAACATATAACTACAAATACAAGAACAACCAA
CTATTACAACCACCACTATTATTTACCCACATCTCATTTATACTCTCATG
GAATAGTAGTCCGAGATGTCGCATAAGAATCACAAATCTAGGCCTCTTTC
AATAACTATCCAGTATCGTTTTAACAGCGCTTTTTTGTGGCTTGCGTACC
GATTATAACACCCTTTTTTTCCGCGCGTATTCGTTTTCCACACTATATAT
TATTGTGTTGCACACAAGCAACATACCACTATTTTTGTTAGCCAAATTAT
CCCATGACGCGTATCACTATCCCCTTGCCACTATCTCTGTATGAGGCACG
CGCGTTGTTTCGCGCACACGAGAGAGCGACGGGTACCGTAGGGATTACGT
TTACGCGCGAGCCCGGTACCTATGTGCGCGTGTAGCGGCGCGCGCGCGCG
GTTATTTCGGCTGGCCGTGGTATTTGGCACGGTGAGCAGTTGGCGGTTGT
GCGTTTTGGCGCGCGTGGTACGTATATGAACAGAGAGACGAATATAGTGA
ATCCACACGTGGCCCGCATCATCATTGTCGTTGTGAACACGCGTTGTGCT
CTGGGACGCGTGCTGAGGCGCGGCGAATTTGCCGACTTGTGCGCATGCAC
CGTGTTGTGCCGCGCGCCGCGTCGTCACGGCGCGTTTGTAACCGCCCACA
CATGTGTTGACTACGCCGTATTTATTTCCCGGTGTGGTGTTCACCGGCNC
TCGCCTCGCGGCCGTTATATTATTCGCGGACCTTGCACCTTCTCACGCCG
TGTGTACGCATATACGCGGCCGGAGAGNCGATGTGTGCGTATATCAACAA
TGGGTGTGTGGTGTGCACGACGGAGGACGCGCGTACAGTTGCTGTGTCGC
GCTGGGCC

CATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXATCTTTGTCTCCTCATAACATCGAGTTT
GGTGTTCTGCACAGAGGTGATGCAAATTTGTTAACTGAAGTTAATACAGG
AAACTGATTCAAGGACTCAGCTTGGCAACTTCCTAATAAGCTTACAGCAT
GTTTATCTGTTAGGGATAGAATGGCAGTGGGGTGGTACTGTCAATACTGG
GCCGCTGCTTCACTATTTAAAAAACAAACAAACAAACAAACAAACAAACA
GAAAAACCTTTACTACTGTGTCTCTTTGCCTTAGAACTAAGCATCTTTCT
ATAAAATGAACTGCATGGCAAAAACATTGGAGGTGACTCTCTCAATATGC
TCAGGAAATGTCTTAGAAGAGGGGCTGGAAGATTAAAGAGCCAGAGGCAA
GAAAACTACTGGGAAAAACAGTATCCTCTAGACATGGCAGGGTAGTTGCA
CTCATGAACTCACAGCAGTTGTGGTTGTCTGTGTAAGACCTTCACAAGAT
CAAGCCAGTCAGCATTCCAGCATAGATGTGGAAGGGCTCTCCAGCTCCAA
CCCTTAGCTGAAGCATTATGTTAATTAATTAATTTGTAATTATTAATTCA
CTTTGCATCCTGATGGCAGCTTTTTCTTCCTTTTCTCTCAGTTCCTCCCC
ACCC

Query= MSMg01no118_d09.g1 MSMg01no118_d09.g1 CHROMAT_FILE:
MSMg01no118_d09.g1 PHD_FILE: MSMg01no118_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:59 2005
         (632 letters)



>mm_chr18_55460359_55461391
          Length = 1033

 Score = 1131 bits (585), Expect = 0.0
 Identities = 620/633 (97%), Gaps = 5/633 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atctttgtctcctca-taacatcgagtttggtgttctgcacagaggtgatgcaaatttgt 59
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctttgtctcctcaataacatcgagtttggtgttctgcacagaggtgatgcaaatttgt 260

                                                                       
Query: 60  taactgaagttaatacaggaaactgattcaaggactcagcttggcaacttcctaataagc 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taactgaagttaatacaggaaactgattcaaggactcagcttggcaacttcctaataagc 320

                                                                       
Query: 120 ttacagcatgtttatctgttagggatagaatggcagtggggtggtactgtcaatactggg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacagcatgtttatctgttagggatagaatggcagtggggtggtactgtcaatactggg 380

                                                                       
Query: 180 ccgctgcttcactatttaaaaaacaaacaaacaaacaaacaaacaaacagaaaaaccttt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccgctgcttcactatttaaaaaacaaacaaacaaacaaacaaacaaacagaaaaaccttt 440

                                                                       
Query: 240 actactgtgtctctttgccttagaactaagcatctttctataaaatgaactgcatggcaa 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actactgtgtctctttgccttagaactaagcatctttctataaaatgaactgcatggcaa 500

                                                                       
Query: 300 aaacattggaggtgactctctcaatatgctcaggaaatgtcttagaagaggggctggaag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacattggaggtgactctctcaatatgctcaggaaatgtcttagaagaggggctggaag 560

                                                                       
Query: 360 attaaagagccagaggcaagaaaactactgggaaaaacagtatcctctagacatggcagg 419
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 561 attaaagagccagaggcaagaaaactactgggaaaaacagtatcctctggacatgtcagg 620

                                                                       
Query: 420 gtagttgcactcatgaactcacagcagttgtggttgtctgtgtaagaccttcacaagatc 479
           | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcagctgcactcatgaactcacagcagttgtggttgtctgtgtaagaccttcacaagatc 680

                                                                       
Query: 480 aagccagtcagcattccagcatagatgtggaagggctctccagctccaacccttagctga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagccagtcagcattccagcatagatgtggaagggctctccagctccaacccttagctga 740

                                                                       
Query: 540 agcattatgttaattaattaatttgtaattattaattcactttgcatcctgatggcagct 599
           ||||||||||||||||||  ||  ||||||||||||||||||||| |||| ||||||| |
Sbjct: 741 agcattatgttaattaat--at--gtaattattaattcactttgcttcctaatggcagtt 796

                                            
Query: 600 ttttcttccttttctctcagttcctccccaccc 632
           |||||||||||||||||||| ||||||||||||
Sbjct: 797 ttttcttccttttctctcaggtcctccccaccc 829


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space:   636306
Effective search space used:   636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)